Lentisphaera araneosa HTCC2155

J. Craig Venter Institute

Genome Size: 2.9 megabases, GC Content: 41.0%, Released Date: June 19, 2007 #18185

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABCK01000001
428.8 KB
337 CDS

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whole genome shotgun sequence
NZ_ABCK01000002
362.0 KB
276 CDS

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whole genome shotgun sequence
NZ_ABCK01000003
337.8 KB
308 CDS

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whole genome shotgun sequence
NZ_ABCK01000004
334.5 KB
271 CDS

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whole genome shotgun sequence
NZ_ABCK01000005
332.0 KB
297 CDS

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whole genome shotgun sequence
NZ_ABCK01000006
324.0 KB
265 CDS

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whole genome shotgun sequence
NZ_ABCK01000007
320.2 KB
261 CDS

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whole genome shotgun sequence
NZ_ABCK01000008
205.7 KB
185 CDS

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whole genome shotgun sequence
NZ_ABCK01000009
199.0 KB
162 CDS

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whole genome shotgun sequence
NZ_ABCK01000010
187.4 KB
145 CDS

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whole genome shotgun sequence
NZ_ABCK01000011
182.7 KB
163 CDS

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whole genome shotgun sequence
NZ_ABCK01000012
181.8 KB
141 CDS

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whole genome shotgun sequence
NZ_ABCK01000013
162.1 KB
147 CDS

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whole genome shotgun sequence
NZ_ABCK01000014
160.8 KB
142 CDS

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whole genome shotgun sequence
NZ_ABCK01000015
149.6 KB
135 CDS

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whole genome shotgun sequence
NZ_ABCK01000016
121.8 KB
101 CDS

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whole genome shotgun sequence
NZ_ABCK01000017
121.2 KB
100 CDS

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whole genome shotgun sequence
NZ_ABCK01000018
112.7 KB
104 CDS

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whole genome shotgun sequence
NZ_ABCK01000019
96.2 KB
86 CDS

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whole genome shotgun sequence
NZ_ABCK01000020
94.9 KB
84 CDS

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whole genome shotgun sequence
NZ_ABCK01000021
89.9 KB
97 CDS

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whole genome shotgun sequence
NZ_ABCK01000022
85.8 KB
65 CDS

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whole genome shotgun sequence
NZ_ABCK01000023
77.5 KB
76 CDS

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whole genome shotgun sequence
NZ_ABCK01000024
76.0 KB
61 CDS

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whole genome shotgun sequence
NZ_ABCK01000025
73.6 KB
80 CDS

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whole genome shotgun sequence
NZ_ABCK01000026
68.7 KB
54 CDS

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whole genome shotgun sequence
NZ_ABCK01000027
63.5 KB
56 CDS

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whole genome shotgun sequence
NZ_ABCK01000028
60.7 KB
59 CDS

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whole genome shotgun sequence
NZ_ABCK01000029
59.7 KB
56 CDS

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whole genome shotgun sequence
NZ_ABCK01000030
57.6 KB
44 CDS

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whole genome shotgun sequence
NZ_ABCK01000031
57.6 KB
48 CDS

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whole genome shotgun sequence
NZ_ABCK01000032
54.0 KB
52 CDS

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whole genome shotgun sequence
NZ_ABCK01000033
52.3 KB
61 CDS

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whole genome shotgun sequence
NZ_ABCK01000034
52.0 KB
54 CDS

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whole genome shotgun sequence
NZ_ABCK01000035
49.2 KB
48 CDS

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whole genome shotgun sequence
NZ_ABCK01000036
43.9 KB
45 CDS

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whole genome shotgun sequence
NZ_ABCK01000037
39.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ABCK01000038
35.1 KB
34 CDS

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whole genome shotgun sequence
NZ_ABCK01000039
34.7 KB
25 CDS

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whole genome shotgun sequence
NZ_ABCK01000040
33.4 KB
28 CDS

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whole genome shotgun sequence
NZ_ABCK01000041
26.1 KB
28 CDS

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whole genome shotgun sequence
NZ_ABCK01000042
25.5 KB
24 CDS

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whole genome shotgun sequence
NZ_ABCK01000043
24.0 KB
29 CDS

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whole genome shotgun sequence
NZ_ABCK01000044
18.8 KB
21 CDS

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whole genome shotgun sequence
NZ_ABCK01000045
17.6 KB
16 CDS

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whole genome shotgun sequence
NZ_ABCK01000046
15.6 KB
17 CDS

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whole genome shotgun sequence
NZ_ABCK01000047
15.3 KB
20 CDS

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whole genome shotgun sequence
NZ_ABCK01000048
15.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ABCK01000049
12.8 KB
10 CDS

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whole genome shotgun sequence
NZ_ABCK01000050
12.3 KB
13 CDS

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whole genome shotgun sequence
NZ_ABCK01000051
11.9 KB
12 CDS

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whole genome shotgun sequence
NZ_ABCK01000052
10.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ABCK01000053
10.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ABCK01000054
10.0 KB
15 CDS

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whole genome shotgun sequence
NZ_ABCK01000055
8.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ABCK01000056
8.3 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCK01000057
8.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCK01000058
4.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCK01000059
4.3 KB
6 CDS

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whole genome shotgun sequence
NZ_ABCK01000060
4.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCK01000061
3.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ABCK01000062
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCK01000063
3.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCK01000064
3.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCK01000065
3.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ABCK01000066
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCK01000067
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCK01000068
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCK01000069
1.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCK01000070
1.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCK01000071
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCK01000072
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCK01000073
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCK01000074
1.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCK01000075
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCK01000076
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCK01000077
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCK01000078
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCK01000079
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCK01000080
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCK01000081
1.1 KB
2 CDS

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PubMed Search for Lentisphaera araneosa HTCC2155

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Taxonomy

External Links

Lentisphaera araneosa HTCC2155

Search Genome

Sequences

PubMed Search for Lentisphaera araneosa HTCC2155

Related Genomes