Lyngbya sp. PCC 8106

J. Craig Venter Institute

Genome Size: 10.0 megabases, GC Content: 41.1%, Released Date: Dec. 15, 2006 #18213

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAVU01000001
298.9 KB
248 CDS

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whole genome shotgun sequence
NZ_AAVU01000002
291.1 KB
247 CDS

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whole genome shotgun sequence
NZ_AAVU01000003
277.5 KB
273 CDS

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whole genome shotgun sequence
NZ_AAVU01000004
233.5 KB
219 CDS

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whole genome shotgun sequence
NZ_AAVU01000005
218.6 KB
195 CDS

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whole genome shotgun sequence
NZ_AAVU01000006
198.4 KB
182 CDS

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whole genome shotgun sequence
NZ_AAVU01000007
183.6 KB
154 CDS

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whole genome shotgun sequence
NZ_AAVU01000008
176.9 KB
127 CDS

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whole genome shotgun sequence
NZ_AAVU01000009
167.5 KB
149 CDS

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whole genome shotgun sequence
NZ_AAVU01000010
167.0 KB
160 CDS

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whole genome shotgun sequence
NZ_AAVU01000011
162.8 KB
116 CDS

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whole genome shotgun sequence
NZ_AAVU01000012
162.0 KB
132 CDS

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whole genome shotgun sequence
NZ_AAVU01000013
159.6 KB
128 CDS

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whole genome shotgun sequence
NZ_AAVU01000014
148.8 KB
124 CDS

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whole genome shotgun sequence
NZ_AAVU01000015
142.1 KB
120 CDS

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whole genome shotgun sequence
NZ_AAVU01000016
141.6 KB
114 CDS

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whole genome shotgun sequence
NZ_AAVU01000017
138.7 KB
130 CDS

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whole genome shotgun sequence
NZ_AAVU01000018
127.7 KB
103 CDS

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whole genome shotgun sequence
NZ_AAVU01000019
127.1 KB
103 CDS

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whole genome shotgun sequence
NZ_AAVU01000020
120.1 KB
120 CDS

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whole genome shotgun sequence
NZ_AAVU01000021
105.8 KB
94 CDS

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whole genome shotgun sequence
NZ_AAVU01000022
99.1 KB
83 CDS

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whole genome shotgun sequence
NZ_AAVU01000023
98.5 KB
94 CDS

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whole genome shotgun sequence
NZ_AAVU01000024
95.0 KB
81 CDS

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whole genome shotgun sequence
NZ_AAVU01000025
94.5 KB
92 CDS

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whole genome shotgun sequence
NZ_AAVU01000026
91.9 KB
82 CDS

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whole genome shotgun sequence
NZ_AAVU01000027
89.7 KB
83 CDS

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whole genome shotgun sequence
NZ_AAVU01000028
87.8 KB
90 CDS

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whole genome shotgun sequence
NZ_AAVU01000029
86.7 KB
71 CDS

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whole genome shotgun sequence
NZ_AAVU01000030
85.3 KB
71 CDS

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whole genome shotgun sequence
NZ_AAVU01000031
82.5 KB
73 CDS

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whole genome shotgun sequence
NZ_AAVU01000032
81.3 KB
81 CDS

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whole genome shotgun sequence
NZ_AAVU01000033
78.1 KB
110 CDS

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whole genome shotgun sequence
NZ_AAVU01000034
76.8 KB
60 CDS

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whole genome shotgun sequence
NZ_AAVU01000035
76.8 KB
63 CDS

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whole genome shotgun sequence
NZ_AAVU01000036
75.4 KB
62 CDS

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whole genome shotgun sequence
NZ_AAVU01000037
74.3 KB
45 CDS

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whole genome shotgun sequence
NZ_AAVU01000038
73.4 KB
71 CDS

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whole genome shotgun sequence
NZ_AAVU01000039
71.7 KB
76 CDS

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whole genome shotgun sequence
NZ_AAVU01000040
71.6 KB
66 CDS

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whole genome shotgun sequence
NZ_AAVU01000041
71.1 KB
67 CDS

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whole genome shotgun sequence
NZ_AAVU01000042
64.7 KB
66 CDS

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whole genome shotgun sequence
NZ_AAVU01000043
62.5 KB
52 CDS

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whole genome shotgun sequence
NZ_AAVU01000044
57.0 KB
47 CDS

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whole genome shotgun sequence
NZ_AAVU01000045
56.6 KB
62 CDS

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whole genome shotgun sequence
NZ_AAVU01000046
54.6 KB
46 CDS

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whole genome shotgun sequence
NZ_AAVU01000047
53.0 KB
47 CDS

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whole genome shotgun sequence
NZ_AAVU01000048
51.6 KB
51 CDS

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whole genome shotgun sequence
NZ_AAVU01000049
49.2 KB
42 CDS

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whole genome shotgun sequence
NZ_AAVU01000050
49.1 KB
49 CDS

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whole genome shotgun sequence
NZ_AAVU01000051
46.4 KB
42 CDS

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whole genome shotgun sequence
NZ_AAVU01000052
44.3 KB
45 CDS

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whole genome shotgun sequence
NZ_AAVU01000053
43.2 KB
37 CDS

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whole genome shotgun sequence
NZ_AAVU01000054
40.4 KB
38 CDS

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whole genome shotgun sequence
NZ_AAVU01000055
36.9 KB
33 CDS

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whole genome shotgun sequence
NZ_AAVU01000056
36.2 KB
24 CDS

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whole genome shotgun sequence
NZ_AAVU01000057
34.3 KB
32 CDS

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whole genome shotgun sequence
NZ_AAVU01000058
32.8 KB
25 CDS

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whole genome shotgun sequence
NZ_AAVU01000059
32.8 KB
33 CDS

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whole genome shotgun sequence
NZ_AAVU01000060
32.4 KB
31 CDS

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whole genome shotgun sequence
NZ_AAVU01000061
31.2 KB
30 CDS

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whole genome shotgun sequence
NZ_AAVU01000062
29.8 KB
32 CDS

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whole genome shotgun sequence
NZ_AAVU01000063
28.8 KB
22 CDS

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whole genome shotgun sequence
NZ_AAVU01000064
28.3 KB
26 CDS

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whole genome shotgun sequence
NZ_AAVU01000065
25.9 KB
20 CDS

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whole genome shotgun sequence
NZ_AAVU01000066
25.1 KB
28 CDS

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whole genome shotgun sequence
NZ_AAVU01000067
25.1 KB
23 CDS

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whole genome shotgun sequence
NZ_AAVU01000068
24.7 KB
25 CDS

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whole genome shotgun sequence
NZ_AAVU01000069
23.7 KB
16 CDS

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whole genome shotgun sequence
NZ_AAVU01000070
22.0 KB
19 CDS

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whole genome shotgun sequence
NZ_AAVU01000071
22.0 KB
14 CDS

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whole genome shotgun sequence
NZ_AAVU01000072
21.6 KB
21 CDS

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whole genome shotgun sequence
NZ_AAVU01000073
18.9 KB
19 CDS

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whole genome shotgun sequence
NZ_AAVU01000074
18.5 KB
20 CDS

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whole genome shotgun sequence
NZ_AAVU01000075
18.3 KB
14 CDS

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whole genome shotgun sequence
NZ_AAVU01000076
17.9 KB
17 CDS

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whole genome shotgun sequence
NZ_AAVU01000077
15.0 KB
19 CDS

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whole genome shotgun sequence
NZ_AAVU01000078
13.7 KB
12 CDS

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whole genome shotgun sequence
NZ_AAVU01000079
13.7 KB
10 CDS

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whole genome shotgun sequence
NZ_AAVU01000080
13.5 KB
13 CDS

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whole genome shotgun sequence
NZ_AAVU01000081
13.2 KB
14 CDS

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whole genome shotgun sequence
NZ_AAVU01000082
12.9 KB
11 CDS

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whole genome shotgun sequence
NZ_AAVU01000083
12.5 KB
18 CDS

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whole genome shotgun sequence
NZ_AAVU01000084
11.1 KB
20 CDS

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whole genome shotgun sequence
NZ_AAVU01000085
9.8 KB
7 CDS

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whole genome shotgun sequence
NZ_AAVU01000086
8.9 KB
9 CDS

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whole genome shotgun sequence
NZ_AAVU01000087
8.8 KB
7 CDS

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whole genome shotgun sequence
NZ_AAVU01000088
8.5 KB
7 CDS

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whole genome shotgun sequence
NZ_AAVU01000089
8.3 KB
11 CDS

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whole genome shotgun sequence
NZ_AAVU01000090
8.0 KB
9 CDS

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whole genome shotgun sequence
NZ_AAVU01000091
6.2 KB
8 CDS

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whole genome shotgun sequence
NZ_AAVU01000092
4.5 KB
4 CDS

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whole genome shotgun sequence
NZ_AAVU01000093
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVU01000094
3.2 KB
7 CDS

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whole genome shotgun sequence
NZ_AAVU01000095
2.2 KB
4 CDS

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whole genome shotgun sequence
NZ_AAVU01000096
2.0 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVU01000097
1.9 KB
6 CDS

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whole genome shotgun sequence
NZ_AAVU01000098
1.9 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVU01000099
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_AAVU01000100
1.8 KB
4 CDS

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whole genome shotgun sequence
NZ_AAVU01000101
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVU01000102
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVU01000103
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVU01000104
1.7 KB
4 CDS

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whole genome shotgun sequence
NZ_AAVU01000105
1.6 KB
4 CDS

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whole genome shotgun sequence
NZ_AAVU01000106
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVU01000107
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_AAVU01000108
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVU01000109
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_AAVU01000110
1.2 KB
3 CDS

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Taxonomy

External Links

Lyngbya sp. PCC 8106

Search Genome

Sequences

PubMed Search for Lyngbya sp. PCC 8106

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