Mannheimia haemolytica PHL213

Baylor College of Medicine

Genome Size: 2.6 megabases, GC Content: 41.1%, Released Date: July 25, 2006 #14998

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000001
23.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000002
52.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000003
2.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000004
5.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000005
6.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000006
11.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000007
22.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000008
24.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000009
32.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000010
41.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000011
48.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000012
43.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000013
34.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000014
5.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000015
30.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000016
70.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000017
16.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000018
3.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000019
17.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000020
21.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000021
40.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000022
23.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000023
2.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000024
7.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000025
11.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000026
26.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000027
39.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000028
15.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000029
14.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000030
7.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000031
21.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000032
13.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000033
5.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000034
1.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000035
5.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000036
3.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000037
22.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000038
4.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000039
3.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000040
3.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000041
4.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000042
5.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000043
2.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000044
4.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000045
4.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000046
3.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000047
6.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000048
3.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000049
15.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000050
48.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000051
30.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000052
21.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000053
7.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000054
7.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000055
59.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000056
36.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000057
10.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000058
73.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000059
5.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000060
8.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000061
24.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000062
31.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000063
102.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000064
4.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000065
29.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000066
21.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000067
84.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000068
25.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000069
11.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000070
26.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000071
5.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000072
22.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000073
40.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000074
41.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000075
27.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000076
27.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000077
33.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000078
77.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000079
4.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000080
26.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000081
8.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000082
18.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000083
15.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000084
14.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000085
23.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000086
20.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000087
21.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000088
13.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000089
49.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000090
17.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000091
40.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000092
7.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000093
32.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000094
13.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000095
18.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000096
22.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000097
10.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000098
16.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000099
1.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000100
7.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000101
5.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000102
11.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000103
3.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000104
10.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000105
13.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000106
2.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000107
2.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000108
33.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000109
1.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000110
9.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000111
4.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000112
10.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000113
1.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000114
1.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000115
13.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000116
14.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000117
18.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000118
7.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000119
1.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000120
7.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000121
8.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000122
10.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000123
8.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000124
9.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000125
5.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000126
9.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000127
2.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000128
10.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000129
4.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000130
13.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000131
4.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000132
1.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000133
1.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000134
2.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000135
5.7 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000136
5.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000137
1.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000138
6.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000139
6.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000140
5.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000141
1006 bytes
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000142
3.9 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000143
2.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000144
3.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000145
3.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000146
1.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000147
1.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000148
2.5 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000149
1.2 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000150
2.8 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000151
1.6 KB
0 CDS

Table view
Circular View
Artemis Viewer

unfinished sequence, whole genome shotgun sequence
NZ_AASA01000152
1.3 KB
0 CDS

Table view
Circular View
Artemis Viewer

References

The genome sequence of Mannheimia haemolytica A1: insights into virulence, natural competence, and Pasteurellaceae phylogeny
Gioia,J., Qin,X., Jiang,H., Clinkenbeard,K., Lo,R., Liu,Y., Fox,G.E., Yerrapragada,S., McLeod,M.P., McNeill,T.Z., Hemphill,L., Sodergren,E., Wang,Q., Muzny,D.M., Homsi,F.J., Weinstock,G.M. and Highlander,S.K. J. Bacteriol. 188 (20), 7257-7266 (2006)
PubMed, PubGet, HubMed

Taxonomy

External Links

Mannheimia haemolytica PHL213

Search Genome

Sequences

References

Related Genomes