Mannheimia haemolytica serotype A2 str. BOVINE

Washington State University

Genome Size: 2.5 megabases, GC Content: 41.1%, Released Date: Oct. 14, 2009 #20454

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACZY01000001
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACZY01000002
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZY01000003
76.9 KB
75 CDS

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whole genome shotgun sequence
NZ_ACZY01000004
35.3 KB
34 CDS

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whole genome shotgun sequence
NZ_ACZY01000005
29.1 KB
26 CDS

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whole genome shotgun sequence
NZ_ACZY01000006
88.3 KB
86 CDS

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whole genome shotgun sequence
NZ_ACZY01000007
92.1 KB
96 CDS

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whole genome shotgun sequence
NZ_ACZY01000008
20.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ACZY01000009
67.7 KB
68 CDS

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whole genome shotgun sequence
NZ_ACZY01000010
23.8 KB
26 CDS

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whole genome shotgun sequence
NZ_ACZY01000011
59.8 KB
60 CDS

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whole genome shotgun sequence
NZ_ACZY01000012
25.5 KB
20 CDS

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whole genome shotgun sequence
NZ_ACZY01000013
3.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ACZY01000014
9.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ACZY01000015
51.9 KB
70 CDS

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whole genome shotgun sequence
NZ_ACZY01000016
23.5 KB
21 CDS

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whole genome shotgun sequence
NZ_ACZY01000017
8.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ACZY01000018
383 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZY01000019
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZY01000020
7.5 KB
9 CDS

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whole genome shotgun sequence
NZ_ACZY01000021
391 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZY01000022
32.2 KB
47 CDS

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whole genome shotgun sequence
NZ_ACZY01000023
28.3 KB
32 CDS

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whole genome shotgun sequence
NZ_ACZY01000024
61.3 KB
62 CDS

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whole genome shotgun sequence
NZ_ACZY01000025
22.1 KB
15 CDS

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whole genome shotgun sequence
NZ_ACZY01000026
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZY01000027
330 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZY01000028
2.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ACZY01000029
31.0 KB
38 CDS

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whole genome shotgun sequence
NZ_ACZY01000030
27.0 KB
30 CDS

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whole genome shotgun sequence
NZ_ACZY01000031
14.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ACZY01000032
49.1 KB
40 CDS

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whole genome shotgun sequence
NZ_ACZY01000033
152.3 KB
162 CDS

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whole genome shotgun sequence
NZ_ACZY01000034
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZY01000035
872 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZY01000036
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZY01000037
14.7 KB
15 CDS

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whole genome shotgun sequence
NZ_ACZY01000038
90.1 KB
96 CDS

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whole genome shotgun sequence
NZ_ACZY01000039
55.8 KB
73 CDS

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whole genome shotgun sequence
NZ_ACZY01000040
68.6 KB
66 CDS

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whole genome shotgun sequence
NZ_ACZY01000041
15.3 KB
21 CDS

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whole genome shotgun sequence
NZ_ACZY01000042
3.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ACZY01000043
15.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ACZY01000044
31.5 KB
37 CDS

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whole genome shotgun sequence
NZ_ACZY01000045
27.1 KB
28 CDS

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whole genome shotgun sequence
NZ_ACZY01000046
22.6 KB
27 CDS

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whole genome shotgun sequence
NZ_ACZY01000047
11.9 KB
12 CDS

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whole genome shotgun sequence
NZ_ACZY01000048
27.0 KB
30 CDS

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whole genome shotgun sequence
NZ_ACZY01000049
382 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZY01000050
7.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ACZY01000051
15.5 KB
20 CDS

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whole genome shotgun sequence
NZ_ACZY01000052
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZY01000053
433 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZY01000054
412 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZY01000055
15.0 KB
16 CDS

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whole genome shotgun sequence
NZ_ACZY01000056
3.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ACZY01000057
7.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ACZY01000058
10.8 KB
7 CDS

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whole genome shotgun sequence
NZ_ACZY01000059
88.6 KB
89 CDS

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whole genome shotgun sequence
NZ_ACZY01000060
118.3 KB
115 CDS

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whole genome shotgun sequence
NZ_ACZY01000061
27.2 KB
33 CDS

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whole genome shotgun sequence
NZ_ACZY01000062
433 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZY01000063
37.9 KB
54 CDS

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whole genome shotgun sequence
NZ_ACZY01000064
16.9 KB
14 CDS

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whole genome shotgun sequence
NZ_ACZY01000065
24.3 KB
21 CDS

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whole genome shotgun sequence
NZ_ACZY01000066
85.3 KB
91 CDS

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whole genome shotgun sequence
NZ_ACZY01000067
82.1 KB
89 CDS

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whole genome shotgun sequence
NZ_ACZY01000068
16.4 KB
19 CDS

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whole genome shotgun sequence
NZ_ACZY01000069
16.8 KB
24 CDS

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whole genome shotgun sequence
NZ_ACZY01000070
396 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZY01000071
29.2 KB
34 CDS

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whole genome shotgun sequence
NZ_ACZY01000072
47.3 KB
42 CDS

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whole genome shotgun sequence
NZ_ACZY01000073
342 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZY01000074
51.7 KB
55 CDS

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whole genome shotgun sequence
NZ_ACZY01000075
337 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZY01000076
13.4 KB
10 CDS

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whole genome shotgun sequence
NZ_ACZY01000077
17.8 KB
18 CDS

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whole genome shotgun sequence
NZ_ACZY01000078
42.6 KB
51 CDS

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whole genome shotgun sequence
NZ_ACZY01000079
3.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ACZY01000080
9.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ACZY01000081
12.4 KB
12 CDS

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whole genome shotgun sequence
NZ_ACZY01000082
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACZY01000083
143.3 KB
143 CDS

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whole genome shotgun sequence
NZ_ACZY01000084
31.5 KB
40 CDS

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Taxonomy

External Links

Mannheimia haemolytica serotype A2 str. BOVINE

Search Genome

Sequences

PubMed Search for Mannheimia haemolytica serotype A2 str. BOVINE

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