Mannheimia haemolytica serotype A2 str. OVINE

Washington State University

Genome Size: 2.6 megabases, GC Content: 41.1%, Released Date: Oct. 14, 2009 #20455

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACZX01000001
35.3 KB
34 CDS

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whole genome shotgun sequence
NZ_ACZX01000002
17.9 KB
15 CDS

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whole genome shotgun sequence
NZ_ACZX01000003
29.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ACZX01000004
20.3 KB
19 CDS

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whole genome shotgun sequence
NZ_ACZX01000005
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZX01000006
5.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ACZX01000007
70.6 KB
72 CDS

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whole genome shotgun sequence
NZ_ACZX01000008
836 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000009
3.4 KB
13 CDS

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whole genome shotgun sequence
NZ_ACZX01000010
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000011
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000012
4.8 KB
7 CDS

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whole genome shotgun sequence
NZ_ACZX01000013
387 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000014
18.8 KB
30 CDS

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whole genome shotgun sequence
NZ_ACZX01000015
78.0 KB
69 CDS

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whole genome shotgun sequence
NZ_ACZX01000016
21.5 KB
20 CDS

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whole genome shotgun sequence
NZ_ACZX01000017
16.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ACZX01000018
715 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000019
26.5 KB
28 CDS

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whole genome shotgun sequence
NZ_ACZX01000020
46.2 KB
49 CDS

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whole genome shotgun sequence
NZ_ACZX01000021
93.1 KB
96 CDS

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whole genome shotgun sequence
NZ_ACZX01000022
42.6 KB
50 CDS

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whole genome shotgun sequence
NZ_ACZX01000023
45.2 KB
54 CDS

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whole genome shotgun sequence
NZ_ACZX01000024
30.5 KB
31 CDS

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whole genome shotgun sequence
NZ_ACZX01000025
633 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000026
1.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000027
3.7 KB
8 CDS

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whole genome shotgun sequence
NZ_ACZX01000028
948 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000029
14.2 KB
25 CDS

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whole genome shotgun sequence
NZ_ACZX01000030
380 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000031
5.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ACZX01000032
75.0 KB
72 CDS

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whole genome shotgun sequence
NZ_ACZX01000033
18.9 KB
19 CDS

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whole genome shotgun sequence
NZ_ACZX01000034
58.8 KB
53 CDS

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whole genome shotgun sequence
NZ_ACZX01000035
15.3 KB
21 CDS

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whole genome shotgun sequence
NZ_ACZX01000036
6.4 KB
8 CDS

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whole genome shotgun sequence
NZ_ACZX01000037
52.9 KB
55 CDS

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whole genome shotgun sequence
NZ_ACZX01000038
31.5 KB
37 CDS

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whole genome shotgun sequence
NZ_ACZX01000039
9.9 KB
12 CDS

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whole genome shotgun sequence
NZ_ACZX01000040
771 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000041
14.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ACZX01000042
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000043
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000044
437 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000045
575 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000046
793 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000047
21.1 KB
26 CDS

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whole genome shotgun sequence
NZ_ACZX01000048
3.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000049
23.8 KB
26 CDS

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whole genome shotgun sequence
NZ_ACZX01000050
45.6 KB
60 CDS

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whole genome shotgun sequence
NZ_ACZX01000051
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000052
5.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ACZX01000053
85.3 KB
90 CDS

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whole genome shotgun sequence
NZ_ACZX01000054
76.4 KB
79 CDS

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whole genome shotgun sequence
NZ_ACZX01000055
137.5 KB
146 CDS

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whole genome shotgun sequence
NZ_ACZX01000056
1.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ACZX01000057
41.5 KB
37 CDS

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whole genome shotgun sequence
NZ_ACZX01000058
340 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000059
13.2 KB
16 CDS

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whole genome shotgun sequence
NZ_ACZX01000060
652 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000061
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000062
2.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ACZX01000063
9.4 KB
12 CDS

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whole genome shotgun sequence
NZ_ACZX01000064
826 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000065
15.5 KB
20 CDS

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whole genome shotgun sequence
NZ_ACZX01000066
13.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ACZX01000067
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000068
28.4 KB
38 CDS

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whole genome shotgun sequence
NZ_ACZX01000069
16.9 KB
14 CDS

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whole genome shotgun sequence
NZ_ACZX01000070
421 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000071
14.7 KB
15 CDS

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whole genome shotgun sequence
NZ_ACZX01000072
359 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000073
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000074
536 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000075
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000076
5.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ACZX01000077
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZX01000078
646 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000079
14.9 KB
16 CDS

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whole genome shotgun sequence
NZ_ACZX01000080
873 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000081
3.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ACZX01000082
615 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000083
21.6 KB
27 CDS

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whole genome shotgun sequence
NZ_ACZX01000084
453 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000085
24.3 KB
21 CDS

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whole genome shotgun sequence
NZ_ACZX01000086
9.7 KB
7 CDS

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whole genome shotgun sequence
NZ_ACZX01000087
320 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000088
1.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ACZX01000089
3.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZX01000090
494 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000091
91.4 KB
89 CDS

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whole genome shotgun sequence
NZ_ACZX01000092
342 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000093
55.4 KB
53 CDS

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whole genome shotgun sequence
NZ_ACZX01000094
11.1 KB
15 CDS

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whole genome shotgun sequence
NZ_ACZX01000095
61.6 KB
63 CDS

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whole genome shotgun sequence
NZ_ACZX01000096
55.8 KB
56 CDS

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whole genome shotgun sequence
NZ_ACZX01000097
11.8 KB
11 CDS

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whole genome shotgun sequence
NZ_ACZX01000098
5.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ACZX01000099
3.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ACZX01000100
3.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ACZX01000101
9.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ACZX01000102
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000103
771 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000104
513 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000105
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZX01000106
22.6 KB
27 CDS

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whole genome shotgun sequence
NZ_ACZX01000107
27.0 KB
30 CDS

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whole genome shotgun sequence
NZ_ACZX01000108
514 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000109
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000110
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000111
3.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ACZX01000112
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000113
321 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000114
737 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000115
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000116
25.3 KB
30 CDS

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whole genome shotgun sequence
NZ_ACZX01000117
342 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000118
5.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ACZX01000119
942 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000120
2.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZX01000121
207.8 KB
204 CDS

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whole genome shotgun sequence
NZ_ACZX01000122
27.3 KB
28 CDS

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whole genome shotgun sequence
NZ_ACZX01000123
2.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ACZX01000124
354 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000125
8.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ACZX01000126
68.7 KB
66 CDS

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whole genome shotgun sequence
NZ_ACZX01000127
27.9 KB
24 CDS

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whole genome shotgun sequence
NZ_ACZX01000128
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000129
38.5 KB
34 CDS

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whole genome shotgun sequence
NZ_ACZX01000130
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZX01000131
2.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZX01000132
17.7 KB
18 CDS

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whole genome shotgun sequence
NZ_ACZX01000133
76.5 KB
73 CDS

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whole genome shotgun sequence
NZ_ACZX01000134
17.0 KB
13 CDS

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whole genome shotgun sequence
NZ_ACZX01000135
17.4 KB
31 CDS

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whole genome shotgun sequence
NZ_ACZX01000136
4.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ACZX01000137
2.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ACZX01000138
1.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ACZX01000139
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZX01000140
604 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000141
380 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACZX01000142
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZX01000143
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACZX01000144
1.5 KB
5 CDS

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Taxonomy

External Links

Mannheimia haemolytica serotype A2 str. OVINE

Search Genome

Sequences

PubMed Search for Mannheimia haemolytica serotype A2 str. OVINE

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