Marinobacter algicola DG893

J. Craig Venter Institute

GC Content: 57.0%, Released Date: June 21, 2007 #18215

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABCP01000001
482.5 KB
442 CDS

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whole genome shotgun sequence
NZ_ABCP01000002
381.5 KB
370 CDS

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whole genome shotgun sequence
NZ_ABCP01000003
180.3 KB
153 CDS

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whole genome shotgun sequence
NZ_ABCP01000004
174.9 KB
173 CDS

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whole genome shotgun sequence
NZ_ABCP01000005
165.5 KB
156 CDS

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whole genome shotgun sequence
NZ_ABCP01000006
164.4 KB
145 CDS

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whole genome shotgun sequence
NZ_ABCP01000007
134.8 KB
130 CDS

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whole genome shotgun sequence
NZ_ABCP01000008
126.2 KB
113 CDS

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whole genome shotgun sequence
NZ_ABCP01000009
125.8 KB
128 CDS

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whole genome shotgun sequence
NZ_ABCP01000010
99.4 KB
102 CDS

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whole genome shotgun sequence
NZ_ABCP01000011
98.0 KB
104 CDS

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whole genome shotgun sequence
NZ_ABCP01000012
77.5 KB
77 CDS

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whole genome shotgun sequence
NZ_ABCP01000013
76.8 KB
94 CDS

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whole genome shotgun sequence
NZ_ABCP01000014
76.5 KB
78 CDS

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whole genome shotgun sequence
NZ_ABCP01000015
69.7 KB
69 CDS

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whole genome shotgun sequence
NZ_ABCP01000016
68.3 KB
74 CDS

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whole genome shotgun sequence
NZ_ABCP01000017
67.0 KB
58 CDS

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whole genome shotgun sequence
NZ_ABCP01000018
66.3 KB
58 CDS

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whole genome shotgun sequence
NZ_ABCP01000019
62.9 KB
54 CDS

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whole genome shotgun sequence
NZ_ABCP01000020
60.7 KB
59 CDS

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whole genome shotgun sequence
NZ_ABCP01000021
58.5 KB
54 CDS

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whole genome shotgun sequence
NZ_ABCP01000022
58.3 KB
61 CDS

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whole genome shotgun sequence
NZ_ABCP01000023
56.7 KB
59 CDS

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whole genome shotgun sequence
NZ_ABCP01000024
54.6 KB
57 CDS

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whole genome shotgun sequence
NZ_ABCP01000025
52.8 KB
60 CDS

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whole genome shotgun sequence
NZ_ABCP01000026
51.5 KB
49 CDS

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whole genome shotgun sequence
NZ_ABCP01000027
48.3 KB
40 CDS

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whole genome shotgun sequence
NZ_ABCP01000028
45.2 KB
43 CDS

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whole genome shotgun sequence
NZ_ABCP01000029
44.1 KB
43 CDS

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whole genome shotgun sequence
NZ_ABCP01000030
43.8 KB
38 CDS

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whole genome shotgun sequence
NZ_ABCP01000031
41.9 KB
34 CDS

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whole genome shotgun sequence
NZ_ABCP01000032
39.7 KB
39 CDS

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whole genome shotgun sequence
NZ_ABCP01000033
38.8 KB
38 CDS

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whole genome shotgun sequence
NZ_ABCP01000034
36.6 KB
31 CDS

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whole genome shotgun sequence
NZ_ABCP01000035
34.7 KB
36 CDS

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whole genome shotgun sequence
NZ_ABCP01000036
33.4 KB
23 CDS

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whole genome shotgun sequence
NZ_ABCP01000037
32.6 KB
34 CDS

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whole genome shotgun sequence
NZ_ABCP01000038
32.1 KB
32 CDS

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whole genome shotgun sequence
NZ_ABCP01000039
31.7 KB
25 CDS

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whole genome shotgun sequence
NZ_ABCP01000040
30.6 KB
27 CDS

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whole genome shotgun sequence
NZ_ABCP01000041
29.7 KB
28 CDS

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whole genome shotgun sequence
NZ_ABCP01000042
27.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ABCP01000043
27.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ABCP01000044
26.5 KB
31 CDS

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whole genome shotgun sequence
NZ_ABCP01000045
26.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ABCP01000046
25.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ABCP01000047
24.6 KB
39 CDS

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whole genome shotgun sequence
NZ_ABCP01000048
24.5 KB
24 CDS

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whole genome shotgun sequence
NZ_ABCP01000049
23.5 KB
28 CDS

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whole genome shotgun sequence
NZ_ABCP01000050
22.8 KB
15 CDS

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whole genome shotgun sequence
NZ_ABCP01000051
21.8 KB
24 CDS

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whole genome shotgun sequence
NZ_ABCP01000052
20.9 KB
19 CDS

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whole genome shotgun sequence
NZ_ABCP01000053
20.8 KB
18 CDS

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whole genome shotgun sequence
NZ_ABCP01000054
20.6 KB
20 CDS

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whole genome shotgun sequence
NZ_ABCP01000055
19.4 KB
19 CDS

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whole genome shotgun sequence
NZ_ABCP01000056
19.1 KB
21 CDS

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whole genome shotgun sequence
NZ_ABCP01000057
18.2 KB
15 CDS

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whole genome shotgun sequence
NZ_ABCP01000058
17.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ABCP01000059
16.3 KB
14 CDS

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whole genome shotgun sequence
NZ_ABCP01000060
15.8 KB
14 CDS

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whole genome shotgun sequence
NZ_ABCP01000061
15.4 KB
14 CDS

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whole genome shotgun sequence
NZ_ABCP01000062
14.7 KB
16 CDS

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whole genome shotgun sequence
NZ_ABCP01000063
13.9 KB
13 CDS

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whole genome shotgun sequence
NZ_ABCP01000064
12.0 KB
12 CDS

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whole genome shotgun sequence
NZ_ABCP01000065
12.0 KB
11 CDS

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whole genome shotgun sequence
NZ_ABCP01000066
11.9 KB
11 CDS

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whole genome shotgun sequence
NZ_ABCP01000067
11.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ABCP01000068
9.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ABCP01000069
9.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCP01000070
8.4 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCP01000071
7.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ABCP01000072
7.0 KB
6 CDS

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whole genome shotgun sequence
NZ_ABCP01000073
7.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ABCP01000074
6.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ABCP01000075
6.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCP01000076
6.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ABCP01000077
6.0 KB
6 CDS

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whole genome shotgun sequence
NZ_ABCP01000078
5.8 KB
6 CDS

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whole genome shotgun sequence
NZ_ABCP01000079
5.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCP01000080
5.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCP01000081
5.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCP01000082
4.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCP01000083
4.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ABCP01000084
4.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCP01000085
4.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ABCP01000086
3.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCP01000087
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCP01000088
2.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCP01000089
2.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCP01000090
2.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCP01000091
2.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCP01000092
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCP01000093
1.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCP01000094
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCP01000095
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCP01000096
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCP01000097
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCP01000098
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCP01000099
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCP01000100
884 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABCP01000101
572 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABCP01000102
228 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABCP01000103
175 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABCP01000104
77 bytes
0 CDS

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Taxonomy

External Links

Marinobacter algicola DG893

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Sequences

PubMed Search for Marinobacter algicola DG893

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