Marinomonas sp. MED121

J. Craig Venter Institute

Genome Size: 5.0 megabases, GC Content: 40.9%, Released Date: Jan. 30, 2006 #18217

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AANE01000001
785.2 KB
760 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000002
530.0 KB
481 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000003
431.1 KB
432 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000004
328.1 KB
340 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000005
279.8 KB
257 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000006
217.8 KB
201 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000007
215.7 KB
212 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000008
181.7 KB
176 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000009
179.1 KB
168 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000010
173.7 KB
165 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000011
162.8 KB
147 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000012
142.5 KB
162 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000013
127.0 KB
117 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000014
123.9 KB
103 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000015
120.1 KB
126 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000016
116.1 KB
123 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000017
104.5 KB
102 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000018
99.5 KB
73 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000019
96.3 KB
93 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000020
87.0 KB
87 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000021
71.6 KB
62 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000022
44.3 KB
41 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000023
42.3 KB
36 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000024
40.5 KB
42 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000025
37.3 KB
37 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000026
30.8 KB
30 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000027
30.2 KB
31 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000028
26.2 KB
26 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000029
18.3 KB
26 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000030
15.9 KB
13 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000031
15.6 KB
16 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000032
15.6 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000033
14.9 KB
12 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000034
13.8 KB
12 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000035
11.5 KB
13 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000036
10.9 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000037
10.7 KB
12 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000038
10.4 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000039
9.2 KB
20 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000040
8.6 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000041
8.5 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000042
3.4 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000043
2.6 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000044
1.9 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000045
1.8 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000046
1.3 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_AANE01000047
1.2 KB
2 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Marinomonas sp. MED121

Search Genome

Sequences

PubMed Search for Marinomonas sp. MED121

Related Genomes