Methanothermobacter thermautotrophicus str. Delta H

Genome Therapeutics Corporation , Ohio State University

Genome Size: 1.8 megabases, GC Content: 49.5%, Released Date: Nov. 26, 1997 #17183

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

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Allow mismatched bases

Sequences

complete genome
NC_000916
1.7 MB
1873 CDS

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References

Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics
Smith,D.R., Doucette-Stamm,L.A., Deloughery,C., Lee,H.-M., Dubois,J., Aldredge,T., Bashirzadeh,R., Blakely,D., Cook,R., Gilbert,K., Harrison,D., Hoang,L., Keagle,P., Lumm,W., Pothier,B., Qiu,D., Spadafora,R., Vicare,R., Wang,Y., Wierzbowski,J., Gibson,R., Jiwani,N., Caruso,A., Bush,D., Safer,H., Patwell,D., Prabhakar,S., McDougall,S., Shimer,G., Goyal,A., Pietrovski,S., Church,G.M., Daniels,C.J., Mao,J.-i., Rice,P., Nolling,J. and Reeve,J.N. J. Bacteriol. 179 (22), 7135-7155 (1997)
PubMed, PubGet, HubMed

Taxonomy

External Links

Methanothermobacter thermautotrophicus str. Delta H

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Sequences

References

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