Microscilla marina ATCC 23134

J. Craig Venter Institute

Genome Size: 5.0 megabases, GC Content: 40.6%, Released Date: Jan. 22, 2007 #18227

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAWS01000001
353.9 KB
312 CDS

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whole genome shotgun sequence
NZ_AAWS01000002
350.8 KB
301 CDS

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whole genome shotgun sequence
NZ_AAWS01000003
312.4 KB
280 CDS

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whole genome shotgun sequence
NZ_AAWS01000004
293.3 KB
276 CDS

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whole genome shotgun sequence
NZ_AAWS01000005
292.1 KB
252 CDS

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whole genome shotgun sequence
NZ_AAWS01000006
288.6 KB
255 CDS

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whole genome shotgun sequence
NZ_AAWS01000007
282.9 KB
243 CDS

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whole genome shotgun sequence
NZ_AAWS01000008
277.6 KB
219 CDS

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whole genome shotgun sequence
NZ_AAWS01000009
275.7 KB
270 CDS

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whole genome shotgun sequence
NZ_AAWS01000010
235.7 KB
212 CDS

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whole genome shotgun sequence
NZ_AAWS01000011
233.4 KB
221 CDS

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whole genome shotgun sequence
NZ_AAWS01000012
231.6 KB
206 CDS

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whole genome shotgun sequence
NZ_AAWS01000013
225.8 KB
204 CDS

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whole genome shotgun sequence
NZ_AAWS01000014
209.0 KB
208 CDS

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whole genome shotgun sequence
NZ_AAWS01000015
185.3 KB
164 CDS

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whole genome shotgun sequence
NZ_AAWS01000016
183.3 KB
188 CDS

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whole genome shotgun sequence
NZ_AAWS01000017
181.1 KB
161 CDS

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whole genome shotgun sequence
NZ_AAWS01000018
170.1 KB
109 CDS

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whole genome shotgun sequence
NZ_AAWS01000019
144.4 KB
113 CDS

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whole genome shotgun sequence
NZ_AAWS01000020
143.7 KB
134 CDS

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whole genome shotgun sequence
NZ_AAWS01000021
143.6 KB
119 CDS

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whole genome shotgun sequence
NZ_AAWS01000022
139.6 KB
115 CDS

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whole genome shotgun sequence
NZ_AAWS01000023
136.7 KB
131 CDS

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whole genome shotgun sequence
NZ_AAWS01000024
133.6 KB
106 CDS

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whole genome shotgun sequence
NZ_AAWS01000025
121.9 KB
111 CDS

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whole genome shotgun sequence
NZ_AAWS01000026
121.5 KB
105 CDS

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whole genome shotgun sequence
NZ_AAWS01000027
120.9 KB
94 CDS

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whole genome shotgun sequence
NZ_AAWS01000028
113.5 KB
91 CDS

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whole genome shotgun sequence
NZ_AAWS01000029
108.6 KB
76 CDS

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whole genome shotgun sequence
NZ_AAWS01000030
105.9 KB
89 CDS

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whole genome shotgun sequence
NZ_AAWS01000031
104.5 KB
86 CDS

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whole genome shotgun sequence
NZ_AAWS01000032
100.6 KB
82 CDS

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whole genome shotgun sequence
NZ_AAWS01000033
98.9 KB
84 CDS

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whole genome shotgun sequence
NZ_AAWS01000034
98.8 KB
90 CDS

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whole genome shotgun sequence
NZ_AAWS01000035
97.4 KB
78 CDS

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whole genome shotgun sequence
NZ_AAWS01000036
96.8 KB
84 CDS

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whole genome shotgun sequence
NZ_AAWS01000037
94.5 KB
74 CDS

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whole genome shotgun sequence
NZ_AAWS01000038
91.8 KB
65 CDS

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whole genome shotgun sequence
NZ_AAWS01000039
90.2 KB
77 CDS

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whole genome shotgun sequence
NZ_AAWS01000040
84.3 KB
75 CDS

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whole genome shotgun sequence
NZ_AAWS01000041
84.2 KB
58 CDS

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whole genome shotgun sequence
NZ_AAWS01000042
78.7 KB
74 CDS

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whole genome shotgun sequence
NZ_AAWS01000043
76.9 KB
52 CDS

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whole genome shotgun sequence
NZ_AAWS01000044
74.5 KB
70 CDS

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whole genome shotgun sequence
NZ_AAWS01000045
72.8 KB
88 CDS

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whole genome shotgun sequence
NZ_AAWS01000046
72.1 KB
67 CDS

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whole genome shotgun sequence
NZ_AAWS01000047
69.3 KB
49 CDS

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whole genome shotgun sequence
NZ_AAWS01000048
67.5 KB
46 CDS

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whole genome shotgun sequence
NZ_AAWS01000049
66.9 KB
73 CDS

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whole genome shotgun sequence
NZ_AAWS01000050
65.1 KB
52 CDS

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whole genome shotgun sequence
NZ_AAWS01000051
65.0 KB
46 CDS

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whole genome shotgun sequence
NZ_AAWS01000052
64.3 KB
54 CDS

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whole genome shotgun sequence
NZ_AAWS01000053
61.4 KB
54 CDS

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whole genome shotgun sequence
NZ_AAWS01000054
59.8 KB
51 CDS

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whole genome shotgun sequence
NZ_AAWS01000055
59.6 KB
46 CDS

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whole genome shotgun sequence
NZ_AAWS01000056
59.2 KB
53 CDS

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whole genome shotgun sequence
NZ_AAWS01000057
56.4 KB
54 CDS

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whole genome shotgun sequence
NZ_AAWS01000058
55.9 KB
52 CDS

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whole genome shotgun sequence
NZ_AAWS01000059
55.1 KB
41 CDS

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whole genome shotgun sequence
NZ_AAWS01000060
53.3 KB
56 CDS

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whole genome shotgun sequence
NZ_AAWS01000061
51.8 KB
43 CDS

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whole genome shotgun sequence
NZ_AAWS01000062
49.8 KB
49 CDS

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whole genome shotgun sequence
NZ_AAWS01000063
49.4 KB
36 CDS

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whole genome shotgun sequence
NZ_AAWS01000064
48.8 KB
50 CDS

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whole genome shotgun sequence
NZ_AAWS01000065
48.4 KB
43 CDS

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whole genome shotgun sequence
NZ_AAWS01000066
45.9 KB
46 CDS

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whole genome shotgun sequence
NZ_AAWS01000067
41.0 KB
35 CDS

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whole genome shotgun sequence
NZ_AAWS01000068
40.6 KB
44 CDS

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whole genome shotgun sequence
NZ_AAWS01000069
39.3 KB
33 CDS

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whole genome shotgun sequence
NZ_AAWS01000070
37.9 KB
28 CDS

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whole genome shotgun sequence
NZ_AAWS01000071
33.8 KB
28 CDS

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whole genome shotgun sequence
NZ_AAWS01000072
33.4 KB
30 CDS

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whole genome shotgun sequence
NZ_AAWS01000073
31.4 KB
33 CDS

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whole genome shotgun sequence
NZ_AAWS01000074
30.8 KB
25 CDS

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whole genome shotgun sequence
NZ_AAWS01000075
30.6 KB
24 CDS

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whole genome shotgun sequence
NZ_AAWS01000076
30.1 KB
29 CDS

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whole genome shotgun sequence
NZ_AAWS01000077
29.8 KB
24 CDS

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whole genome shotgun sequence
NZ_AAWS01000078
28.2 KB
27 CDS

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whole genome shotgun sequence
NZ_AAWS01000079
27.9 KB
14 CDS

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whole genome shotgun sequence
NZ_AAWS01000080
25.3 KB
32 CDS

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whole genome shotgun sequence
NZ_AAWS01000081
22.8 KB
18 CDS

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whole genome shotgun sequence
NZ_AAWS01000082
22.5 KB
29 CDS

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whole genome shotgun sequence
NZ_AAWS01000083
20.4 KB
16 CDS

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whole genome shotgun sequence
NZ_AAWS01000084
19.6 KB
12 CDS

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whole genome shotgun sequence
NZ_AAWS01000085
18.3 KB
10 CDS

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whole genome shotgun sequence
NZ_AAWS01000086
17.5 KB
14 CDS

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whole genome shotgun sequence
NZ_AAWS01000087
15.8 KB
10 CDS

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whole genome shotgun sequence
NZ_AAWS01000088
15.2 KB
13 CDS

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whole genome shotgun sequence
NZ_AAWS01000089
14.8 KB
7 CDS

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whole genome shotgun sequence
NZ_AAWS01000090
14.5 KB
10 CDS

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whole genome shotgun sequence
NZ_AAWS01000091
13.9 KB
10 CDS

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whole genome shotgun sequence
NZ_AAWS01000092
13.7 KB
13 CDS

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whole genome shotgun sequence
NZ_AAWS01000093
12.5 KB
13 CDS

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whole genome shotgun sequence
NZ_AAWS01000094
12.4 KB
11 CDS

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whole genome shotgun sequence
NZ_AAWS01000095
12.3 KB
11 CDS

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whole genome shotgun sequence
NZ_AAWS01000096
11.6 KB
16 CDS

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whole genome shotgun sequence
NZ_AAWS01000097
11.5 KB
8 CDS

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whole genome shotgun sequence
NZ_AAWS01000098
10.8 KB
9 CDS

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whole genome shotgun sequence
NZ_AAWS01000099
10.6 KB
11 CDS

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whole genome shotgun sequence
NZ_AAWS01000100
7.5 KB
5 CDS

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whole genome shotgun sequence
NZ_AAWS01000101
7.4 KB
7 CDS

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whole genome shotgun sequence
NZ_AAWS01000102
6.6 KB
0 CDS

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whole genome shotgun sequence
NZ_AAWS01000103
6.4 KB
6 CDS

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whole genome shotgun sequence
NZ_AAWS01000104
6.3 KB
9 CDS

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whole genome shotgun sequence
NZ_AAWS01000105
6.3 KB
5 CDS

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whole genome shotgun sequence
NZ_AAWS01000106
5.9 KB
8 CDS

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whole genome shotgun sequence
NZ_AAWS01000107
5.6 KB
5 CDS

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whole genome shotgun sequence
NZ_AAWS01000108
3.8 KB
5 CDS

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whole genome shotgun sequence
NZ_AAWS01000109
3.2 KB
4 CDS

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whole genome shotgun sequence
NZ_AAWS01000110
2.9 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000111
2.7 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000112
2.7 KB
4 CDS

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whole genome shotgun sequence
NZ_AAWS01000113
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAWS01000114
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAWS01000115
2.2 KB
3 CDS

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whole genome shotgun sequence
NZ_AAWS01000116
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000117
2.1 KB
1 CDS

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whole genome shotgun sequence
NZ_AAWS01000118
2.0 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000119
1.9 KB
3 CDS

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whole genome shotgun sequence
NZ_AAWS01000120
1.9 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000121
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000122
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_AAWS01000123
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_AAWS01000124
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAWS01000125
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000126
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000127
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_AAWS01000128
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000129
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000130
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_AAWS01000131
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAWS01000132
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_AAWS01000133
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_AAWS01000134
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_AAWS01000135
1.0 KB
2 CDS

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Taxonomy

External Links

Microscilla marina ATCC 23134

Search Genome

Sequences

PubMed Search for Microscilla marina ATCC 23134

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