Mobiluncus curtisii subsp. holmesii ATCC 35242

Baylor College of Medicine

Released Date: Dec. 27, 2010 #20466

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00001, whole genome shotgun sequence
NZ_AEPZ01000001
304.2 KB
274 CDS

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contig00002, whole genome shotgun sequence
NZ_AEPZ01000002
541 bytes
0 CDS

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contig00003, whole genome shotgun sequence
NZ_AEPZ01000003
204.5 KB
165 CDS

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contig00004, whole genome shotgun sequence
NZ_AEPZ01000004
1.8 KB
2 CDS

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contig00005, whole genome shotgun sequence
NZ_AEPZ01000005
458.8 KB
431 CDS

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contig00006, whole genome shotgun sequence
NZ_AEPZ01000006
564 bytes
1 CDS

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contig00007, whole genome shotgun sequence
NZ_AEPZ01000007
133.9 KB
126 CDS

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contig00008, whole genome shotgun sequence
NZ_AEPZ01000008
172.2 KB
161 CDS

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contig00009, whole genome shotgun sequence
NZ_AEPZ01000009
4.7 KB
5 CDS

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contig00010, whole genome shotgun sequence
NZ_AEPZ01000010
504.1 KB
456 CDS

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contig00011, whole genome shotgun sequence
NZ_AEPZ01000011
10.6 KB
11 CDS

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contig00012, whole genome shotgun sequence
NZ_AEPZ01000012
235.1 KB
193 CDS

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contig00013, whole genome shotgun sequence
NZ_AEPZ01000013
5.3 KB
0 CDS

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contig00014, whole genome shotgun sequence
NZ_AEPZ01000014
1.3 KB
2 CDS

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contig00015, whole genome shotgun sequence
NZ_AEPZ01000015
528 bytes
1 CDS

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contig00016, whole genome shotgun sequence
NZ_AEPZ01000016
527 bytes
1 CDS

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Taxonomy

External Links

Mobiluncus curtisii subsp. holmesii ATCC 35242

Search Genome

Sequences

PubMed Search for Mobiluncus curtisii subsp. holmesii ATCC 35242

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