Mycobacterium tuberculosis EAS054

Broad Institute

GC Content: 65.3%, Released Date: May 30, 2008 #18239

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABOV01000001
1.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABOV01000002
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000003
20.2 KB
18 CDS

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whole genome shotgun sequence
NZ_ABOV01000004
956 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000005
157.2 KB
136 CDS

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whole genome shotgun sequence
NZ_ABOV01000006
55.6 KB
57 CDS

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whole genome shotgun sequence
NZ_ABOV01000007
41.6 KB
47 CDS

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whole genome shotgun sequence
NZ_ABOV01000008
3.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ABOV01000009
626 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000010
43.0 KB
42 CDS

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whole genome shotgun sequence
NZ_ABOV01000011
228 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000012
975 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000013
66.1 KB
71 CDS

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whole genome shotgun sequence
NZ_ABOV01000014
2.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000015
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000016
608 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000017
19.8 KB
20 CDS

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whole genome shotgun sequence
NZ_ABOV01000018
64.9 KB
80 CDS

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whole genome shotgun sequence
NZ_ABOV01000019
2.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ABOV01000020
481 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000021
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000022
543 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000023
80.9 KB
88 CDS

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whole genome shotgun sequence
NZ_ABOV01000024
790 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000025
580 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000026
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000027
910 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000028
34.7 KB
35 CDS

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whole genome shotgun sequence
NZ_ABOV01000029
123.2 KB
111 CDS

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whole genome shotgun sequence
NZ_ABOV01000030
969 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000031
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000032
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000033
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABOV01000034
22.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ABOV01000035
65.4 KB
70 CDS

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whole genome shotgun sequence
NZ_ABOV01000036
17.2 KB
16 CDS

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whole genome shotgun sequence
NZ_ABOV01000037
2.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ABOV01000038
562 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000039
3.5 KB
7 CDS

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whole genome shotgun sequence
NZ_ABOV01000040
616 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000041
44.1 KB
47 CDS

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whole genome shotgun sequence
NZ_ABOV01000042
18.9 KB
28 CDS

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whole genome shotgun sequence
NZ_ABOV01000043
99.9 KB
84 CDS

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whole genome shotgun sequence
NZ_ABOV01000044
404 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000045
13.4 KB
10 CDS

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whole genome shotgun sequence
NZ_ABOV01000046
60.7 KB
54 CDS

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whole genome shotgun sequence
NZ_ABOV01000047
17.5 KB
13 CDS

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whole genome shotgun sequence
NZ_ABOV01000048
11.9 KB
9 CDS

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whole genome shotgun sequence
NZ_ABOV01000049
938 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000050
80.2 KB
72 CDS

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whole genome shotgun sequence
NZ_ABOV01000051
281 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000052
10.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ABOV01000053
33.9 KB
36 CDS

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whole genome shotgun sequence
NZ_ABOV01000054
11.5 KB
10 CDS

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whole genome shotgun sequence
NZ_ABOV01000055
539 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000056
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABOV01000057
877 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000058
24.3 KB
23 CDS

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whole genome shotgun sequence
NZ_ABOV01000059
161.7 KB
151 CDS

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whole genome shotgun sequence
NZ_ABOV01000060
34.1 KB
25 CDS

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whole genome shotgun sequence
NZ_ABOV01000061
620 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000062
14.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ABOV01000063
37.7 KB
32 CDS

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whole genome shotgun sequence
NZ_ABOV01000064
76.2 KB
73 CDS

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whole genome shotgun sequence
NZ_ABOV01000065
994 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000066
67.5 KB
63 CDS

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whole genome shotgun sequence
NZ_ABOV01000067
292.1 KB
300 CDS

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whole genome shotgun sequence
NZ_ABOV01000068
28.3 KB
29 CDS

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whole genome shotgun sequence
NZ_ABOV01000069
30.0 KB
34 CDS

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whole genome shotgun sequence
NZ_ABOV01000070
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000071
2.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ABOV01000072
860 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000073
94.3 KB
93 CDS

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whole genome shotgun sequence
NZ_ABOV01000074
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000075
165.8 KB
151 CDS

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whole genome shotgun sequence
NZ_ABOV01000076
16.2 KB
17 CDS

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whole genome shotgun sequence
NZ_ABOV01000077
6.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ABOV01000078
74.9 KB
66 CDS

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whole genome shotgun sequence
NZ_ABOV01000079
893 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000080
4.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000081
496 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000082
406 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000083
6.8 KB
9 CDS

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whole genome shotgun sequence
NZ_ABOV01000084
21.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ABOV01000085
29.8 KB
23 CDS

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whole genome shotgun sequence
NZ_ABOV01000086
5.5 KB
9 CDS

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whole genome shotgun sequence
NZ_ABOV01000087
57.9 KB
52 CDS

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whole genome shotgun sequence
NZ_ABOV01000088
117.9 KB
132 CDS

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whole genome shotgun sequence
NZ_ABOV01000089
90.9 KB
102 CDS

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whole genome shotgun sequence
NZ_ABOV01000090
11.8 KB
11 CDS

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whole genome shotgun sequence
NZ_ABOV01000091
3.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ABOV01000092
773 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000093
67.8 KB
71 CDS

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whole genome shotgun sequence
NZ_ABOV01000094
139.9 KB
103 CDS

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whole genome shotgun sequence
NZ_ABOV01000095
231.7 KB
233 CDS

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whole genome shotgun sequence
NZ_ABOV01000096
120.4 KB
108 CDS

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whole genome shotgun sequence
NZ_ABOV01000097
580 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000098
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000099
563 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABOV01000100
607 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABOV01000101
571 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000102
38.0 KB
22 CDS

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whole genome shotgun sequence
NZ_ABOV01000103
20.3 KB
19 CDS

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whole genome shotgun sequence
NZ_ABOV01000104
121.5 KB
119 CDS

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whole genome shotgun sequence
NZ_ABOV01000105
558 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000106
583 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000107
627 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000108
3.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ABOV01000109
840 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000110
937 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABOV01000111
724 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABOV01000112
333 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000113
80.5 KB
79 CDS

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whole genome shotgun sequence
NZ_ABOV01000114
3.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ABOV01000115
518 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000116
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABOV01000117
50.8 KB
54 CDS

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whole genome shotgun sequence
NZ_ABOV01000118
54.9 KB
59 CDS

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whole genome shotgun sequence
NZ_ABOV01000119
7.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABOV01000120
155.2 KB
134 CDS

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whole genome shotgun sequence
NZ_ABOV01000121
153.4 KB
142 CDS

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whole genome shotgun sequence
NZ_ABOV01000122
29.6 KB
32 CDS

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whole genome shotgun sequence
NZ_ABOV01000123
57.0 KB
44 CDS

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whole genome shotgun sequence
NZ_ABOV01000124
91.6 KB
83 CDS

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whole genome shotgun sequence
NZ_ABOV01000125
87.4 KB
72 CDS

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Taxonomy

External Links

Mycobacterium tuberculosis EAS054

Search Genome

Sequences

PubMed Search for Mycobacterium tuberculosis EAS054

Related Genomes