Mycobacterium tuberculosis KZN 605

Broad Institute

GC Content: 65.4%, Released Date: Oct. 30, 2007 #18244

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABGN01000001
9.1 KB
8 CDS

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whole genome shotgun sequence
NZ_ABGN01000002
1.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABGN01000003
368.9 KB
334 CDS

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whole genome shotgun sequence
NZ_ABGN01000004
56.1 KB
58 CDS

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whole genome shotgun sequence
NZ_ABGN01000005
750 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000006
4.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ABGN01000007
79.8 KB
78 CDS

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whole genome shotgun sequence
NZ_ABGN01000008
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ABGN01000009
274 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000010
3.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABGN01000011
14.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ABGN01000012
83.2 KB
85 CDS

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whole genome shotgun sequence
NZ_ABGN01000013
244 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABGN01000014
16.7 KB
15 CDS

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whole genome shotgun sequence
NZ_ABGN01000015
760 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000016
20.7 KB
19 CDS

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whole genome shotgun sequence
NZ_ABGN01000017
36.3 KB
24 CDS

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whole genome shotgun sequence
NZ_ABGN01000018
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000019
714 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000020
22.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ABGN01000021
247.6 KB
252 CDS

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whole genome shotgun sequence
NZ_ABGN01000022
133.5 KB
124 CDS

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whole genome shotgun sequence
NZ_ABGN01000023
2.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000024
90.4 KB
92 CDS

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whole genome shotgun sequence
NZ_ABGN01000025
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000026
20.4 KB
19 CDS

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whole genome shotgun sequence
NZ_ABGN01000027
3.1 KB
8 CDS

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whole genome shotgun sequence
NZ_ABGN01000028
63.6 KB
73 CDS

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whole genome shotgun sequence
NZ_ABGN01000029
98.6 KB
85 CDS

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whole genome shotgun sequence
NZ_ABGN01000030
429 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000031
81.8 KB
74 CDS

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whole genome shotgun sequence
NZ_ABGN01000032
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABGN01000033
12.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ABGN01000034
382 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000035
79.5 KB
69 CDS

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whole genome shotgun sequence
NZ_ABGN01000036
504 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000037
44.4 KB
45 CDS

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whole genome shotgun sequence
NZ_ABGN01000038
12.5 KB
11 CDS

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whole genome shotgun sequence
NZ_ABGN01000039
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000040
2.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ABGN01000041
136.5 KB
121 CDS

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whole genome shotgun sequence
NZ_ABGN01000042
284 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000043
73.9 KB
63 CDS

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whole genome shotgun sequence
NZ_ABGN01000044
844 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000045
443 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000046
121.6 KB
110 CDS

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whole genome shotgun sequence
NZ_ABGN01000047
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000048
8.3 KB
11 CDS

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whole genome shotgun sequence
NZ_ABGN01000049
45.0 KB
38 CDS

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whole genome shotgun sequence
NZ_ABGN01000050
14.1 KB
13 CDS

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whole genome shotgun sequence
NZ_ABGN01000051
25.3 KB
23 CDS

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whole genome shotgun sequence
NZ_ABGN01000052
90.0 KB
92 CDS

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whole genome shotgun sequence
NZ_ABGN01000053
30.9 KB
42 CDS

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whole genome shotgun sequence
NZ_ABGN01000054
140.8 KB
140 CDS

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whole genome shotgun sequence
NZ_ABGN01000055
30.8 KB
31 CDS

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whole genome shotgun sequence
NZ_ABGN01000056
35.2 KB
40 CDS

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whole genome shotgun sequence
NZ_ABGN01000057
3.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABGN01000058
92.3 KB
86 CDS

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whole genome shotgun sequence
NZ_ABGN01000059
31.7 KB
30 CDS

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whole genome shotgun sequence
NZ_ABGN01000060
77.1 KB
77 CDS

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whole genome shotgun sequence
NZ_ABGN01000061
37.5 KB
31 CDS

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whole genome shotgun sequence
NZ_ABGN01000062
18.7 KB
16 CDS

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whole genome shotgun sequence
NZ_ABGN01000063
99.3 KB
91 CDS

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whole genome shotgun sequence
NZ_ABGN01000064
4.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000065
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABGN01000066
116.5 KB
103 CDS

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whole genome shotgun sequence
NZ_ABGN01000067
127.2 KB
150 CDS

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whole genome shotgun sequence
NZ_ABGN01000068
105.5 KB
117 CDS

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whole genome shotgun sequence
NZ_ABGN01000069
310.6 KB
277 CDS

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whole genome shotgun sequence
NZ_ABGN01000070
948 bytes
3 CDS

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whole genome shotgun sequence
NZ_ABGN01000071
641 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000072
81.3 KB
88 CDS

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whole genome shotgun sequence
NZ_ABGN01000073
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000074
1.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABGN01000075
2.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ABGN01000076
2.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ABGN01000077
80.4 KB
86 CDS

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whole genome shotgun sequence
NZ_ABGN01000078
26.3 KB
22 CDS

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whole genome shotgun sequence
NZ_ABGN01000079
44.6 KB
54 CDS

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whole genome shotgun sequence
NZ_ABGN01000080
847 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000081
47.1 KB
43 CDS

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whole genome shotgun sequence
NZ_ABGN01000082
867 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000083
52.2 KB
57 CDS

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whole genome shotgun sequence
NZ_ABGN01000084
199.7 KB
173 CDS

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whole genome shotgun sequence
NZ_ABGN01000085
22.9 KB
17 CDS

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whole genome shotgun sequence
NZ_ABGN01000086
719 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000087
996 bytes
4 CDS

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whole genome shotgun sequence
NZ_ABGN01000088
309 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000089
415 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000090
150.3 KB
124 CDS

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whole genome shotgun sequence
NZ_ABGN01000091
2.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ABGN01000092
3.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ABGN01000093
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000094
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABGN01000095
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000096
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000097
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000098
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000099
774 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABGN01000100
822 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000101
717 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000102
1019 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABGN01000103
1.2 KB
1 CDS

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Taxonomy

External Links

Mycobacterium tuberculosis KZN 605

Search Genome

Sequences

PubMed Search for Mycobacterium tuberculosis KZN 605

Related Genomes