Mycoplasma fermentans PG18

M Bio Technology Incorporation

Genome Size: 1.0 megabases, Released Date: June 2, 2009 #19972

Completed genome

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

DNA, nearly complete genome
AP009608
980.5 KB
893 CDS

Table view
Circular View
Artemis Viewer

References

Molecular cloning and expression of a novel cholinephosphotransferase involved in glycoglycerophospholipid biosynthesis of Mycoplasma fermentans
Ishida,N., Irikura,D., Matsuda,K., Sato,S., Sone,T., Tanaka,M. and Asano,K. Curr. Microbiol. 58 (6), 535-540 (2009)
PubMed, PubGet, HubMed

Taxonomy

External Links

Mycoplasma fermentans PG18

Search Genome

Sequences

References

Related Genomes