Mycoplasma hominis

NCBI

Genome Size: 0.67 megabases, Released Date: Nov. 16, 2009 #17229

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
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Allow mismatched bases

Sequences

complete genome
NC_013511
649.8 KB
523 CDS

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References

Life on arginine for Mycoplasma hominis: clues from its minimal genome and comparison with other human urogenital mycoplasmas
Pereyre,S., Sirand-Pugnet,P., Beven,L., Charron,A., Renaudin,H., Barre,A., Avenaud,P., Jacob,D., Couloux,A., Barbe,V., de Daruvar,A., Blanchard,A. and Bebear,C. PLoS Genet. 5 (10), E1000677 (2009)
PubMed, PubGet, HubMed

Taxonomy

External Links

Mycoplasma hominis

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Sequences

References

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