Mycoplasma hyorhinis HUB-1

Division of Animal Infectious Diseases, State Key Laboratory of Agricultural Microbiology Huazhong Agricultural University , Tianjin Biochip

Genome Size: 0.84 megabases, Released Date: Aug. 20, 2010 #19974

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

complete genome
CP002170
819.9 KB
657 CDS

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References

Complete genome sequence of Mycoplasma hyorhinis strain HUB-1
Liu,W., Fang,L., Li,S., Li,Q., Zhou,Z., Feng,Z., Luo,R., Shao,G., Wang,L., Chen,H. and Xiao,S. J. Bacteriol. 192 (21), 5844-5845 (2010)
PubMed, PubGet, HubMed

Taxonomy

External Links

Mycoplasma hyorhinis HUB-1

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Sequences

References

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