Mycoplasma pneumoniae FH

J. Craig Venter Institute

Genome Size: 0.81 megabases, Released Date: July 29, 2010 #19977

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

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Allow mismatched bases

Sequences

complete genome
CP002077
792.1 KB
629 CDS

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References

Targeted chromosomal knockouts in Mycoplasma pneumoniae
Krishnakumar,R., Assad-Garcia,N., Benders,G.A., Phan,Q., Montague,M.G. and Glass,J.I. Appl. Environ. Microbiol. 76 (15), 5297-5299 (2010)
PubMed, PubGet, HubMed

Taxonomy

External Links

Mycoplasma pneumoniae FH

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Sequences

References

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