Neisseria gonorrhoeae NCCP11945

Korea Centers for Disease Control and Prevention , Genotech corp.

Genome Size: 2.2 megabases, GC Content: 52.4%, Released Date: July 9, 2008 #17246

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

complete genome
NC_011035
2.1 MB
2662 CDS

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plasmid pNGK
NC_011034
4.1 KB
12 CDS

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Circular View
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References

Complete genome sequence of Neisseria gonorrhoeae NCCP11945
Chung,G.T., Yoo,J.S., Oh,H.B., Lee,Y.S., Cha,S.H., Kim,S.J. and Yoo,C.K. J. Bacteriol. 190 (17), 6035-6036 (2008)
PubMed, PubGet, HubMed

Taxonomy

External Links

Neisseria gonorrhoeae NCCP11945

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Sequences

References

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