Neisseria meningitidis 8013

INSERM , Imperial College London , Institut Pasteur

Genome Size: 2.3 megabases, GC Content: 51.4%, Released Date: Oct. 15, 2009 #19979

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

complete genome
FM999788
2.2 MB
2126 CDS

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References

NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitidis
Rusniok,C., Vallenet,D., Floquet,S., Ewles,H., Mouze-Soulama,C., Brown,D., Lajus,A., Buchrieser,C., Medigue,C., Glaser,P. and Pelicic,V. Genome Biol. 10 (10), R110 (2009)
PubMed, PubGet, HubMed

Taxonomy

External Links

Neisseria meningitidis 8013

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Sequences

References

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