Nitrobacter sp. Nb-311A

J. Craig Venter Institute

GC Content: 60.4%, Released Date: Jan. 24, 2006 #18271

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAMY01000001
446.6 KB
416 CDS

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whole genome shotgun sequence
NZ_AAMY01000002
353.2 KB
360 CDS

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whole genome shotgun sequence
NZ_AAMY01000003
296.4 KB
317 CDS

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whole genome shotgun sequence
NZ_AAMY01000004
219.9 KB
243 CDS

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whole genome shotgun sequence
NZ_AAMY01000005
156.5 KB
154 CDS

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whole genome shotgun sequence
NZ_AAMY01000006
143.9 KB
133 CDS

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whole genome shotgun sequence
NZ_AAMY01000007
135.1 KB
147 CDS

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whole genome shotgun sequence
NZ_AAMY01000008
115.2 KB
120 CDS

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whole genome shotgun sequence
NZ_AAMY01000009
112.8 KB
103 CDS

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whole genome shotgun sequence
NZ_AAMY01000010
112.5 KB
121 CDS

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whole genome shotgun sequence
NZ_AAMY01000011
112.2 KB
133 CDS

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whole genome shotgun sequence
NZ_AAMY01000012
110.3 KB
150 CDS

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whole genome shotgun sequence
NZ_AAMY01000013
110.2 KB
94 CDS

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whole genome shotgun sequence
NZ_AAMY01000014
101.4 KB
113 CDS

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whole genome shotgun sequence
NZ_AAMY01000015
94.4 KB
84 CDS

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whole genome shotgun sequence
NZ_AAMY01000016
82.0 KB
80 CDS

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whole genome shotgun sequence
NZ_AAMY01000017
78.9 KB
79 CDS

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whole genome shotgun sequence
NZ_AAMY01000018
75.9 KB
75 CDS

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whole genome shotgun sequence
NZ_AAMY01000019
75.5 KB
82 CDS

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whole genome shotgun sequence
NZ_AAMY01000020
74.0 KB
84 CDS

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whole genome shotgun sequence
NZ_AAMY01000021
71.6 KB
102 CDS

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whole genome shotgun sequence
NZ_AAMY01000022
71.4 KB
57 CDS

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whole genome shotgun sequence
NZ_AAMY01000023
55.2 KB
63 CDS

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whole genome shotgun sequence
NZ_AAMY01000024
49.9 KB
46 CDS

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whole genome shotgun sequence
NZ_AAMY01000025
44.8 KB
61 CDS

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whole genome shotgun sequence
NZ_AAMY01000026
44.4 KB
55 CDS

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whole genome shotgun sequence
NZ_AAMY01000027
42.7 KB
44 CDS

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whole genome shotgun sequence
NZ_AAMY01000028
37.6 KB
31 CDS

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whole genome shotgun sequence
NZ_AAMY01000029
35.4 KB
45 CDS

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whole genome shotgun sequence
NZ_AAMY01000030
33.1 KB
39 CDS

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whole genome shotgun sequence
NZ_AAMY01000031
31.4 KB
37 CDS

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whole genome shotgun sequence
NZ_AAMY01000032
30.3 KB
30 CDS

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whole genome shotgun sequence
NZ_AAMY01000033
28.9 KB
26 CDS

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whole genome shotgun sequence
NZ_AAMY01000034
28.9 KB
25 CDS

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whole genome shotgun sequence
NZ_AAMY01000035
28.1 KB
39 CDS

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whole genome shotgun sequence
NZ_AAMY01000036
26.9 KB
32 CDS

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whole genome shotgun sequence
NZ_AAMY01000037
25.3 KB
18 CDS

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whole genome shotgun sequence
NZ_AAMY01000038
24.4 KB
30 CDS

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whole genome shotgun sequence
NZ_AAMY01000039
22.5 KB
32 CDS

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whole genome shotgun sequence
NZ_AAMY01000040
20.5 KB
30 CDS

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whole genome shotgun sequence
NZ_AAMY01000041
20.1 KB
24 CDS

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whole genome shotgun sequence
NZ_AAMY01000042
19.7 KB
27 CDS

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whole genome shotgun sequence
NZ_AAMY01000043
19.5 KB
27 CDS

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whole genome shotgun sequence
NZ_AAMY01000044
19.0 KB
22 CDS

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whole genome shotgun sequence
NZ_AAMY01000045
17.0 KB
18 CDS

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whole genome shotgun sequence
NZ_AAMY01000046
15.5 KB
16 CDS

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whole genome shotgun sequence
NZ_AAMY01000047
14.2 KB
18 CDS

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whole genome shotgun sequence
NZ_AAMY01000048
13.2 KB
18 CDS

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whole genome shotgun sequence
NZ_AAMY01000049
13.0 KB
18 CDS

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whole genome shotgun sequence
NZ_AAMY01000050
12.7 KB
20 CDS

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whole genome shotgun sequence
NZ_AAMY01000051
12.6 KB
16 CDS

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whole genome shotgun sequence
NZ_AAMY01000052
11.2 KB
17 CDS

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whole genome shotgun sequence
NZ_AAMY01000053
10.3 KB
17 CDS

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whole genome shotgun sequence
NZ_AAMY01000054
9.8 KB
14 CDS

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whole genome shotgun sequence
NZ_AAMY01000055
9.3 KB
10 CDS

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whole genome shotgun sequence
NZ_AAMY01000056
9.2 KB
10 CDS

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whole genome shotgun sequence
NZ_AAMY01000057
8.2 KB
12 CDS

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whole genome shotgun sequence
NZ_AAMY01000058
4.8 KB
7 CDS

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whole genome shotgun sequence
NZ_AAMY01000059
3.1 KB
5 CDS

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whole genome shotgun sequence
NZ_AAMY01000060
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_AAMY01000061
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAMY01000062
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAMY01000063
1.2 KB
1 CDS

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Taxonomy

External Links

Nitrobacter sp. Nb-311A

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Sequences

PubMed Search for Nitrobacter sp. Nb-311A

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