Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111

DOE Joint Genome Institute

Genome Size: 6.58 megabases, GC Content: 72.7%, Released Date: April 30, 2009 #19983

Completed genome

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Annotation search: search for genes and features in this genome

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Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

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Allow mismatched bases

Sequences

complete genome
CP002040
5.5 MB
4798 CDS

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plasmid pNDAS01
CP002041
757.2 KB
699 CDS

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Taxonomy

External Links

Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111

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Sequences

PubMed Search for Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111

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