Oenococcus oeni ATCC BAA-1163

Laboratorie de Universite de Bourgogne

Genome Size: 1.8 megabases, GC Content: 37.9%, Released Date: Nov. 28, 2006 #18281

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAUV01000001
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_AAUV01000002
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAUV01000003
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAUV01000004
1.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AAUV01000005
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_AAUV01000006
721 bytes
0 CDS

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whole genome shotgun sequence
NZ_AAUV01000007
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_AAUV01000008
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AAUV01000009
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_AAUV01000010
2.3 KB
1 CDS

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whole genome shotgun sequence
NZ_AAUV01000011
1.5 KB
4 CDS

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whole genome shotgun sequence
NZ_AAUV01000012
1.7 KB
3 CDS

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whole genome shotgun sequence
NZ_AAUV01000013
3.2 KB
3 CDS

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whole genome shotgun sequence
NZ_AAUV01000014
2.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AAUV01000015
3.9 KB
6 CDS

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whole genome shotgun sequence
NZ_AAUV01000016
3.7 KB
4 CDS

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whole genome shotgun sequence
NZ_AAUV01000017
4.7 KB
9 CDS

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whole genome shotgun sequence
NZ_AAUV01000018
5.4 KB
6 CDS

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whole genome shotgun sequence
NZ_AAUV01000019
2.6 KB
5 CDS

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whole genome shotgun sequence
NZ_AAUV01000020
5.3 KB
7 CDS

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whole genome shotgun sequence
NZ_AAUV01000021
8.3 KB
8 CDS

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whole genome shotgun sequence
NZ_AAUV01000022
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_AAUV01000023
6.6 KB
9 CDS

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whole genome shotgun sequence
NZ_AAUV01000024
5.9 KB
2 CDS

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whole genome shotgun sequence
NZ_AAUV01000025
6.9 KB
8 CDS

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whole genome shotgun sequence
NZ_AAUV01000026
8.3 KB
7 CDS

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whole genome shotgun sequence
NZ_AAUV01000027
10.6 KB
9 CDS

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whole genome shotgun sequence
NZ_AAUV01000028
12.5 KB
13 CDS

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whole genome shotgun sequence
NZ_AAUV01000029
16.2 KB
14 CDS

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whole genome shotgun sequence
NZ_AAUV01000030
14.3 KB
13 CDS

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whole genome shotgun sequence
NZ_AAUV01000031
19.7 KB
25 CDS

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whole genome shotgun sequence
NZ_AAUV01000032
19.0 KB
19 CDS

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whole genome shotgun sequence
NZ_AAUV01000033
21.6 KB
24 CDS

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whole genome shotgun sequence
NZ_AAUV01000034
21.0 KB
21 CDS

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whole genome shotgun sequence
NZ_AAUV01000035
16.4 KB
16 CDS

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whole genome shotgun sequence
NZ_AAUV01000036
18.5 KB
16 CDS

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whole genome shotgun sequence
NZ_AAUV01000037
19.2 KB
12 CDS

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whole genome shotgun sequence
NZ_AAUV01000038
26.8 KB
27 CDS

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whole genome shotgun sequence
NZ_AAUV01000039
34.2 KB
33 CDS

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whole genome shotgun sequence
NZ_AAUV01000040
29.8 KB
29 CDS

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whole genome shotgun sequence
NZ_AAUV01000041
33.3 KB
35 CDS

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whole genome shotgun sequence
NZ_AAUV01000042
34.6 KB
30 CDS

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whole genome shotgun sequence
NZ_AAUV01000043
36.4 KB
41 CDS

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whole genome shotgun sequence
NZ_AAUV01000044
42.0 KB
35 CDS

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whole genome shotgun sequence
NZ_AAUV01000045
43.5 KB
42 CDS

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whole genome shotgun sequence
NZ_AAUV01000046
29.5 KB
29 CDS

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whole genome shotgun sequence
NZ_AAUV01000047
47.8 KB
48 CDS

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whole genome shotgun sequence
NZ_AAUV01000048
57.4 KB
66 CDS

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whole genome shotgun sequence
NZ_AAUV01000049
46.7 KB
45 CDS

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whole genome shotgun sequence
NZ_AAUV01000050
41.0 KB
38 CDS

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whole genome shotgun sequence
NZ_AAUV01000051
65.0 KB
64 CDS

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whole genome shotgun sequence
NZ_AAUV01000052
71.4 KB
65 CDS

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whole genome shotgun sequence
NZ_AAUV01000053
60.2 KB
61 CDS

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whole genome shotgun sequence
NZ_AAUV01000054
53.3 KB
52 CDS

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whole genome shotgun sequence
NZ_AAUV01000055
73.5 KB
78 CDS

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whole genome shotgun sequence
NZ_AAUV01000056
74.6 KB
73 CDS

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whole genome shotgun sequence
NZ_AAUV01000057
78.6 KB
76 CDS

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whole genome shotgun sequence
NZ_AAUV01000058
99.2 KB
93 CDS

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whole genome shotgun sequence
NZ_AAUV01000059
99.8 KB
94 CDS

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whole genome shotgun sequence
NZ_AAUV01000060
98.3 KB
96 CDS

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whole genome shotgun sequence
NZ_AAUV01000061
157.3 KB
138 CDS

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whole genome shotgun sequence
NZ_AAUV01000062
4.3 KB
4 CDS

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Taxonomy

External Links

Oenococcus oeni ATCC BAA-1163

Search Genome

Sequences

PubMed Search for Oenococcus oeni ATCC BAA-1163

Related Genomes