Pasteurella dagmatis ATCC 43325

Baylor College of Medicine

Genome Size: 2.2 megabases, GC Content: 37.4%, Released Date: Oct. 6, 2009 #20518

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACZR01000001
228.2 KB
234 CDS

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whole genome shotgun sequence
NZ_ACZR01000002
154.4 KB
152 CDS

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whole genome shotgun sequence
NZ_ACZR01000003
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACZR01000004
3.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACZR01000005
282.3 KB
245 CDS

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whole genome shotgun sequence
NZ_ACZR01000006
101.8 KB
109 CDS

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whole genome shotgun sequence
NZ_ACZR01000007
14.3 KB
14 CDS

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whole genome shotgun sequence
NZ_ACZR01000008
20.9 KB
16 CDS

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whole genome shotgun sequence
NZ_ACZR01000009
124.2 KB
116 CDS

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whole genome shotgun sequence
NZ_ACZR01000010
46.2 KB
46 CDS

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whole genome shotgun sequence
NZ_ACZR01000011
198.5 KB
189 CDS

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whole genome shotgun sequence
NZ_ACZR01000012
53.0 KB
35 CDS

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whole genome shotgun sequence
NZ_ACZR01000013
214.4 KB
189 CDS

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whole genome shotgun sequence
NZ_ACZR01000014
301.1 KB
263 CDS

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whole genome shotgun sequence
NZ_ACZR01000015
1.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACZR01000016
3.9 KB
9 CDS

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whole genome shotgun sequence
NZ_ACZR01000017
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZR01000018
248.6 KB
231 CDS

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whole genome shotgun sequence
NZ_ACZR01000019
82.6 KB
77 CDS

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whole genome shotgun sequence
NZ_ACZR01000020
16.5 KB
21 CDS

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whole genome shotgun sequence
NZ_ACZR01000021
59.3 KB
69 CDS

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whole genome shotgun sequence
NZ_ACZR01000022
28.3 KB
24 CDS

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whole genome shotgun sequence
NZ_ACZR01000023
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZR01000024
673 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZR01000025
752 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZR01000026
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACZR01000027
613 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACZR01000028
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ACZR01000029
774 bytes
1 CDS

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Taxonomy

External Links

Pasteurella dagmatis ATCC 43325

Search Genome

Sequences

PubMed Search for Pasteurella dagmatis ATCC 43325

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