Pasteuria nishizawae str. North American

University of Illinois at Urbana-Champaign

Genome Size: 0.02 megabases, GC Content: 48.4%, Released Date: July 23, 2003 #18291

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AACR01000001
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AACR01000002
1.1 KB
3 CDS

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whole genome shotgun sequence
NZ_AACR01000003
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_AACR01000004
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_AACR01000005
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_AACR01000006
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_AACR01000007
1015 bytes
2 CDS

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whole genome shotgun sequence
NZ_AACR01000008
996 bytes
2 CDS

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whole genome shotgun sequence
NZ_AACR01000009
982 bytes
2 CDS

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whole genome shotgun sequence
NZ_AACR01000010
949 bytes
2 CDS

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whole genome shotgun sequence
NZ_AACR01000011
943 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000012
884 bytes
0 CDS

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whole genome shotgun sequence
NZ_AACR01000013
804 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000014
738 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000015
730 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000016
717 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000017
662 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000018
632 bytes
2 CDS

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whole genome shotgun sequence
NZ_AACR01000019
622 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000020
607 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000021
589 bytes
0 CDS

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whole genome shotgun sequence
NZ_AACR01000022
583 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000023
510 bytes
0 CDS

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whole genome shotgun sequence
NZ_AACR01000024
444 bytes
1 CDS

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whole genome shotgun sequence
NZ_AACR01000025
260 bytes
1 CDS

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Taxonomy

External Links

Pasteuria nishizawae str. North American

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Sequences

PubMed Search for Pasteuria nishizawae str. North American

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