Peptoniphilus lacrimalis 315-B

J. Craig Venter Institute

Genome Size: 1.7 megabases, GC Content: 29.9%, Released Date: Dec. 15, 2009 #20524

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ADDO01000001
9.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ADDO01000002
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000003
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ADDO01000004
16.9 KB
18 CDS

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whole genome shotgun sequence
NZ_ADDO01000005
17.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ADDO01000006
23.8 KB
18 CDS

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whole genome shotgun sequence
NZ_ADDO01000007
252 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADDO01000008
691 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000009
20.2 KB
18 CDS

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whole genome shotgun sequence
NZ_ADDO01000010
5.7 KB
8 CDS

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whole genome shotgun sequence
NZ_ADDO01000011
55.1 KB
45 CDS

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whole genome shotgun sequence
NZ_ADDO01000012
259 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000013
8.5 KB
7 CDS

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whole genome shotgun sequence
NZ_ADDO01000014
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000015
3.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000016
473 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000017
65.8 KB
55 CDS

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whole genome shotgun sequence
NZ_ADDO01000018
258 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADDO01000019
5.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ADDO01000020
985 bytes
2 CDS

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whole genome shotgun sequence
NZ_ADDO01000021
185.6 KB
168 CDS

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whole genome shotgun sequence
NZ_ADDO01000022
981 bytes
2 CDS

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whole genome shotgun sequence
NZ_ADDO01000023
84.2 KB
89 CDS

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whole genome shotgun sequence
NZ_ADDO01000024
932 bytes
2 CDS

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whole genome shotgun sequence
NZ_ADDO01000025
12.2 KB
11 CDS

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whole genome shotgun sequence
NZ_ADDO01000026
369 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000027
5.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ADDO01000028
13.8 KB
9 CDS

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whole genome shotgun sequence
NZ_ADDO01000029
389 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000030
10.9 KB
12 CDS

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whole genome shotgun sequence
NZ_ADDO01000031
31.9 KB
30 CDS

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whole genome shotgun sequence
NZ_ADDO01000032
9.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ADDO01000033
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ADDO01000034
69.8 KB
65 CDS

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whole genome shotgun sequence
NZ_ADDO01000035
35.3 KB
34 CDS

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whole genome shotgun sequence
NZ_ADDO01000036
1.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ADDO01000037
453 bytes
2 CDS

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whole genome shotgun sequence
NZ_ADDO01000038
628 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000039
287 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000040
233 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADDO01000041
87.2 KB
114 CDS

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whole genome shotgun sequence
NZ_ADDO01000042
5.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ADDO01000043
47.3 KB
43 CDS

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whole genome shotgun sequence
NZ_ADDO01000044
664 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000045
23.2 KB
15 CDS

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whole genome shotgun sequence
NZ_ADDO01000046
456 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000047
2.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000048
811 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000049
362 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADDO01000050
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ADDO01000051
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ADDO01000052
71.7 KB
59 CDS

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whole genome shotgun sequence
NZ_ADDO01000053
5.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ADDO01000054
271 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000055
73.4 KB
79 CDS

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whole genome shotgun sequence
NZ_ADDO01000056
770 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000057
173.7 KB
165 CDS

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whole genome shotgun sequence
NZ_ADDO01000058
36.5 KB
37 CDS

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whole genome shotgun sequence
NZ_ADDO01000059
802 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000060
25.1 KB
26 CDS

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whole genome shotgun sequence
NZ_ADDO01000061
61.6 KB
53 CDS

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whole genome shotgun sequence
NZ_ADDO01000062
27.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ADDO01000063
136.4 KB
138 CDS

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whole genome shotgun sequence
NZ_ADDO01000064
47.0 KB
42 CDS

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whole genome shotgun sequence
NZ_ADDO01000065
3.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ADDO01000066
15.6 KB
14 CDS

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whole genome shotgun sequence
NZ_ADDO01000067
370 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADDO01000068
49.2 KB
46 CDS

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whole genome shotgun sequence
NZ_ADDO01000069
43.5 KB
45 CDS

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whole genome shotgun sequence
NZ_ADDO01000070
8.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ADDO01000071
1.4 KB
2 CDS

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Taxonomy

External Links

Peptoniphilus lacrimalis 315-B

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Sequences

PubMed Search for Peptoniphilus lacrimalis 315-B

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