Peptostreptococcus anaerobius 653-L

J. Craig Venter Institute

Genome Size: 2.08309 megabases, GC Content: 35.9%, Released Date: Feb. 18, 2010 #20527

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00036, whole genome shotgun sequence
NZ_ADJN01000001
16.2 KB
12 CDS

Table view
Circular View
Artemis Viewer

contig00035, whole genome shotgun sequence
NZ_ADJN01000002
63.3 KB
62 CDS

Table view
Circular View
Artemis Viewer

contig00077, whole genome shotgun sequence
NZ_ADJN01000003
4.5 KB
3 CDS

Table view
Circular View
Artemis Viewer

contig00022, whole genome shotgun sequence
NZ_ADJN01000004
30.6 KB
27 CDS

Table view
Circular View
Artemis Viewer

contig00086, whole genome shotgun sequence
NZ_ADJN01000005
601 bytes
1 CDS

Table view
Circular View
Artemis Viewer

contig00006, whole genome shotgun sequence
NZ_ADJN01000006
764 bytes
0 CDS

Table view
Circular View
Artemis Viewer

contig00029, whole genome shotgun sequence
NZ_ADJN01000007
13.0 KB
11 CDS

Table view
Circular View
Artemis Viewer

contig00019, whole genome shotgun sequence
NZ_ADJN01000008
46.1 KB
47 CDS

Table view
Circular View
Artemis Viewer

contig00087, whole genome shotgun sequence
NZ_ADJN01000009
1.4 KB
2 CDS

Table view
Circular View
Artemis Viewer

contig00017, whole genome shotgun sequence
NZ_ADJN01000010
1.1 KB
2 CDS

Table view
Circular View
Artemis Viewer

contig00048, whole genome shotgun sequence
NZ_ADJN01000011
3.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

contig00066, whole genome shotgun sequence
NZ_ADJN01000012
52.4 KB
47 CDS

Table view
Circular View
Artemis Viewer

contig00090, whole genome shotgun sequence
NZ_ADJN01000013
541 bytes
0 CDS

Table view
Circular View
Artemis Viewer

contig00030, whole genome shotgun sequence
NZ_ADJN01000014
16.4 KB
13 CDS

Table view
Circular View
Artemis Viewer

contig00068, whole genome shotgun sequence
NZ_ADJN01000015
180.2 KB
184 CDS

Table view
Circular View
Artemis Viewer

contig00074, whole genome shotgun sequence
NZ_ADJN01000016
44.4 KB
35 CDS

Table view
Circular View
Artemis Viewer

contig00021, whole genome shotgun sequence
NZ_ADJN01000017
20.5 KB
14 CDS

Table view
Circular View
Artemis Viewer

contig00010, whole genome shotgun sequence
NZ_ADJN01000018
120.8 KB
105 CDS

Table view
Circular View
Artemis Viewer

contig00034, whole genome shotgun sequence
NZ_ADJN01000019
20.8 KB
17 CDS

Table view
Circular View
Artemis Viewer

contig00039, whole genome shotgun sequence
NZ_ADJN01000020
7.8 KB
6 CDS

Table view
Circular View
Artemis Viewer

contig00011, whole genome shotgun sequence
NZ_ADJN01000021
25.1 KB
23 CDS

Table view
Circular View
Artemis Viewer

contig00053, whole genome shotgun sequence
NZ_ADJN01000022
704 bytes
1 CDS

Table view
Circular View
Artemis Viewer

contig00079, whole genome shotgun sequence
NZ_ADJN01000023
705 bytes
1 CDS

Table view
Circular View
Artemis Viewer

contig00032, whole genome shotgun sequence
NZ_ADJN01000024
10.5 KB
11 CDS

Table view
Circular View
Artemis Viewer

contig00056, whole genome shotgun sequence
NZ_ADJN01000025
34.5 KB
32 CDS

Table view
Circular View
Artemis Viewer

contig00043, whole genome shotgun sequence
NZ_ADJN01000026
17.7 KB
14 CDS

Table view
Circular View
Artemis Viewer

contig00078, whole genome shotgun sequence
NZ_ADJN01000027
20.9 KB
16 CDS

Table view
Circular View
Artemis Viewer

contig00069, whole genome shotgun sequence
NZ_ADJN01000028
6.7 KB
7 CDS

Table view
Circular View
Artemis Viewer

contig00045, whole genome shotgun sequence
NZ_ADJN01000029
9.6 KB
9 CDS

Table view
Circular View
Artemis Viewer

contig00012, whole genome shotgun sequence
NZ_ADJN01000030
3.6 KB
3 CDS

Table view
Circular View
Artemis Viewer

contig00016, whole genome shotgun sequence
NZ_ADJN01000031
4.6 KB
10 CDS

Table view
Circular View
Artemis Viewer

contig00062, whole genome shotgun sequence
NZ_ADJN01000032
916 bytes
1 CDS

Table view
Circular View
Artemis Viewer

contig00072, whole genome shotgun sequence
NZ_ADJN01000033
2.7 KB
2 CDS

Table view
Circular View
Artemis Viewer

contig00067, whole genome shotgun sequence
NZ_ADJN01000034
2.3 KB
2 CDS

Table view
Circular View
Artemis Viewer

contig00088, whole genome shotgun sequence
NZ_ADJN01000035
5.7 KB
7 CDS

Table view
Circular View
Artemis Viewer

contig00080, whole genome shotgun sequence
NZ_ADJN01000036
48.9 KB
34 CDS

Table view
Circular View
Artemis Viewer

contig00049, whole genome shotgun sequence
NZ_ADJN01000037
15.6 KB
16 CDS

Table view
Circular View
Artemis Viewer

contig00020, whole genome shotgun sequence
NZ_ADJN01000038
49.3 KB
36 CDS

Table view
Circular View
Artemis Viewer

contig00075, whole genome shotgun sequence
NZ_ADJN01000039
1.4 KB
3 CDS

Table view
Circular View
Artemis Viewer

contig00065, whole genome shotgun sequence
NZ_ADJN01000040
15.0 KB
17 CDS

Table view
Circular View
Artemis Viewer

contig00081, whole genome shotgun sequence
NZ_ADJN01000041
1.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

contig00084, whole genome shotgun sequence
NZ_ADJN01000042
16.1 KB
17 CDS

Table view
Circular View
Artemis Viewer

contig00082, whole genome shotgun sequence
NZ_ADJN01000043
150.1 KB
123 CDS

Table view
Circular View
Artemis Viewer

contig00001, whole genome shotgun sequence
NZ_ADJN01000044
1.1 KB
1 CDS

Table view
Circular View
Artemis Viewer

contig00018, whole genome shotgun sequence
NZ_ADJN01000045
23.4 KB
20 CDS

Table view
Circular View
Artemis Viewer

contig00033, whole genome shotgun sequence
NZ_ADJN01000046
1.1 KB
1 CDS

Table view
Circular View
Artemis Viewer

contig00026, whole genome shotgun sequence
NZ_ADJN01000047
63.5 KB
56 CDS

Table view
Circular View
Artemis Viewer

contig00031, whole genome shotgun sequence
NZ_ADJN01000048
9.3 KB
11 CDS

Table view
Circular View
Artemis Viewer

contig00044, whole genome shotgun sequence
NZ_ADJN01000049
2.6 KB
1 CDS

Table view
Circular View
Artemis Viewer

contig00015, whole genome shotgun sequence
NZ_ADJN01000050
88.6 KB
83 CDS

Table view
Circular View
Artemis Viewer

contig00083, whole genome shotgun sequence
NZ_ADJN01000051
851 bytes
1 CDS

Table view
Circular View
Artemis Viewer

contig00071, whole genome shotgun sequence
NZ_ADJN01000052
537 bytes
0 CDS

Table view
Circular View
Artemis Viewer

contig00055, whole genome shotgun sequence
NZ_ADJN01000053
1.1 KB
2 CDS

Table view
Circular View
Artemis Viewer

contig00025, whole genome shotgun sequence
NZ_ADJN01000054
71.5 KB
76 CDS

Table view
Circular View
Artemis Viewer

contig00064, whole genome shotgun sequence
NZ_ADJN01000055
1.4 KB
0 CDS

Table view
Circular View
Artemis Viewer

contig00023, whole genome shotgun sequence
NZ_ADJN01000056
50.4 KB
44 CDS

Table view
Circular View
Artemis Viewer

contig00046, whole genome shotgun sequence
NZ_ADJN01000057
91.3 KB
86 CDS

Table view
Circular View
Artemis Viewer

contig00051, whole genome shotgun sequence
NZ_ADJN01000058
49.2 KB
46 CDS

Table view
Circular View
Artemis Viewer

contig00024, whole genome shotgun sequence
NZ_ADJN01000059
59.4 KB
70 CDS

Table view
Circular View
Artemis Viewer

contig00014, whole genome shotgun sequence
NZ_ADJN01000060
19.1 KB
14 CDS

Table view
Circular View
Artemis Viewer

contig00005, whole genome shotgun sequence
NZ_ADJN01000061
1.5 KB
1 CDS

Table view
Circular View
Artemis Viewer

contig00002, whole genome shotgun sequence
NZ_ADJN01000062
24.2 KB
17 CDS

Table view
Circular View
Artemis Viewer

contig00040, whole genome shotgun sequence
NZ_ADJN01000063
76.1 KB
69 CDS

Table view
Circular View
Artemis Viewer

contig00008, whole genome shotgun sequence
NZ_ADJN01000064
42.6 KB
31 CDS

Table view
Circular View
Artemis Viewer

contig00057, whole genome shotgun sequence
NZ_ADJN01000065
108.6 KB
127 CDS

Table view
Circular View
Artemis Viewer

contig00052, whole genome shotgun sequence
NZ_ADJN01000066
13.3 KB
12 CDS

Table view
Circular View
Artemis Viewer

contig00007, whole genome shotgun sequence
NZ_ADJN01000067
560 bytes
1 CDS

Table view
Circular View
Artemis Viewer

contig00042, whole genome shotgun sequence
NZ_ADJN01000068
1.4 KB
2 CDS

Table view
Circular View
Artemis Viewer

contig00003, whole genome shotgun sequence
NZ_ADJN01000069
43.0 KB
37 CDS

Table view
Circular View
Artemis Viewer

contig00038, whole genome shotgun sequence
NZ_ADJN01000070
19.0 KB
17 CDS

Table view
Circular View
Artemis Viewer

contig00041, whole genome shotgun sequence
NZ_ADJN01000071
837 bytes
2 CDS

Table view
Circular View
Artemis Viewer

contig00047, whole genome shotgun sequence
NZ_ADJN01000072
79.1 KB
69 CDS

Table view
Circular View
Artemis Viewer

contig00004, whole genome shotgun sequence
NZ_ADJN01000073
1.6 KB
1 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Peptostreptococcus anaerobius 653-L

Search Genome

Sequences

PubMed Search for Peptostreptococcus anaerobius 653-L

Related Genomes