Phaeobacter gallaeciensis 2.10

J. Craig Venter Institute

GC Content: 59.8%, Released Date: Nov. 30, 2007 #18295

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABIE01000001
527.6 KB
541 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000002
323.1 KB
324 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000003
318.2 KB
312 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000004
304.3 KB
305 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000005
255.2 KB
254 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000006
215.5 KB
196 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000007
208.1 KB
193 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000008
199.4 KB
185 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000009
174.0 KB
178 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000010
164.1 KB
150 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000011
141.0 KB
139 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000012
138.2 KB
140 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000013
124.7 KB
124 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000014
114.9 KB
103 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000015
96.8 KB
89 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000016
89.2 KB
73 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000017
69.6 KB
52 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000018
67.7 KB
64 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000019
58.5 KB
48 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000020
57.5 KB
54 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000021
54.4 KB
50 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000022
54.0 KB
60 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000023
52.6 KB
49 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000024
48.4 KB
46 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000025
47.8 KB
48 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000026
35.1 KB
35 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000027
30.0 KB
35 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000028
29.0 KB
35 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000029
28.2 KB
32 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000030
14.4 KB
15 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000031
12.5 KB
13 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000032
3.2 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ABIE01000033
2.7 KB
3 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Phaeobacter gallaeciensis 2.10

Search Genome

Sequences

PubMed Search for Phaeobacter gallaeciensis 2.10

Related Genomes