Planctomyces maris DSM 8797

J. Craig Venter Institute

GC Content: 50.5%, Released Date: June 15, 2007 #18301

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABCE01000001
390.4 KB
280 CDS

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whole genome shotgun sequence
NZ_ABCE01000002
379.0 KB
342 CDS

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whole genome shotgun sequence
NZ_ABCE01000003
356.7 KB
308 CDS

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whole genome shotgun sequence
NZ_ABCE01000004
280.4 KB
240 CDS

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whole genome shotgun sequence
NZ_ABCE01000005
250.1 KB
193 CDS

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whole genome shotgun sequence
NZ_ABCE01000006
248.7 KB
240 CDS

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whole genome shotgun sequence
NZ_ABCE01000007
213.8 KB
174 CDS

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whole genome shotgun sequence
NZ_ABCE01000008
208.1 KB
181 CDS

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whole genome shotgun sequence
NZ_ABCE01000009
204.5 KB
176 CDS

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whole genome shotgun sequence
NZ_ABCE01000010
195.4 KB
191 CDS

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whole genome shotgun sequence
NZ_ABCE01000011
192.5 KB
148 CDS

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whole genome shotgun sequence
NZ_ABCE01000012
176.2 KB
133 CDS

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whole genome shotgun sequence
NZ_ABCE01000013
169.3 KB
131 CDS

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whole genome shotgun sequence
NZ_ABCE01000014
160.2 KB
139 CDS

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whole genome shotgun sequence
NZ_ABCE01000015
156.7 KB
152 CDS

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whole genome shotgun sequence
NZ_ABCE01000016
148.7 KB
133 CDS

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whole genome shotgun sequence
NZ_ABCE01000017
148.4 KB
130 CDS

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whole genome shotgun sequence
NZ_ABCE01000018
142.8 KB
118 CDS

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whole genome shotgun sequence
NZ_ABCE01000019
140.3 KB
119 CDS

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whole genome shotgun sequence
NZ_ABCE01000020
135.2 KB
113 CDS

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whole genome shotgun sequence
NZ_ABCE01000021
132.0 KB
123 CDS

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whole genome shotgun sequence
NZ_ABCE01000022
126.0 KB
79 CDS

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whole genome shotgun sequence
NZ_ABCE01000023
124.0 KB
101 CDS

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whole genome shotgun sequence
NZ_ABCE01000024
114.1 KB
87 CDS

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whole genome shotgun sequence
NZ_ABCE01000025
110.0 KB
84 CDS

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whole genome shotgun sequence
NZ_ABCE01000026
107.6 KB
92 CDS

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whole genome shotgun sequence
NZ_ABCE01000027
105.6 KB
95 CDS

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whole genome shotgun sequence
NZ_ABCE01000028
105.0 KB
95 CDS

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whole genome shotgun sequence
NZ_ABCE01000029
103.6 KB
86 CDS

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whole genome shotgun sequence
NZ_ABCE01000030
102.7 KB
82 CDS

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whole genome shotgun sequence
NZ_ABCE01000031
102.0 KB
78 CDS

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whole genome shotgun sequence
NZ_ABCE01000032
95.8 KB
88 CDS

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whole genome shotgun sequence
NZ_ABCE01000033
88.1 KB
70 CDS

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whole genome shotgun sequence
NZ_ABCE01000034
87.5 KB
78 CDS

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whole genome shotgun sequence
NZ_ABCE01000035
85.4 KB
67 CDS

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whole genome shotgun sequence
NZ_ABCE01000036
85.3 KB
67 CDS

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whole genome shotgun sequence
NZ_ABCE01000037
82.8 KB
68 CDS

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whole genome shotgun sequence
NZ_ABCE01000038
76.4 KB
68 CDS

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whole genome shotgun sequence
NZ_ABCE01000039
61.0 KB
63 CDS

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whole genome shotgun sequence
NZ_ABCE01000040
59.6 KB
58 CDS

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whole genome shotgun sequence
NZ_ABCE01000041
59.1 KB
48 CDS

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whole genome shotgun sequence
NZ_ABCE01000042
56.2 KB
51 CDS

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whole genome shotgun sequence
NZ_ABCE01000043
56.0 KB
51 CDS

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whole genome shotgun sequence
NZ_ABCE01000044
55.6 KB
45 CDS

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whole genome shotgun sequence
NZ_ABCE01000045
55.1 KB
50 CDS

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whole genome shotgun sequence
NZ_ABCE01000046
49.2 KB
40 CDS

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whole genome shotgun sequence
NZ_ABCE01000047
47.3 KB
36 CDS

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whole genome shotgun sequence
NZ_ABCE01000048
45.4 KB
35 CDS

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whole genome shotgun sequence
NZ_ABCE01000049
43.2 KB
40 CDS

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whole genome shotgun sequence
NZ_ABCE01000050
41.4 KB
39 CDS

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whole genome shotgun sequence
NZ_ABCE01000051
41.4 KB
35 CDS

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whole genome shotgun sequence
NZ_ABCE01000052
40.0 KB
29 CDS

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whole genome shotgun sequence
NZ_ABCE01000053
37.5 KB
32 CDS

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whole genome shotgun sequence
NZ_ABCE01000054
37.2 KB
39 CDS

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whole genome shotgun sequence
NZ_ABCE01000055
35.8 KB
24 CDS

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whole genome shotgun sequence
NZ_ABCE01000056
33.3 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCE01000057
33.2 KB
33 CDS

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whole genome shotgun sequence
NZ_ABCE01000058
32.6 KB
49 CDS

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whole genome shotgun sequence
NZ_ABCE01000059
31.1 KB
24 CDS

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whole genome shotgun sequence
NZ_ABCE01000060
28.0 KB
23 CDS

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whole genome shotgun sequence
NZ_ABCE01000061
27.6 KB
23 CDS

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whole genome shotgun sequence
NZ_ABCE01000062
26.9 KB
19 CDS

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whole genome shotgun sequence
NZ_ABCE01000063
23.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ABCE01000064
22.9 KB
22 CDS

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whole genome shotgun sequence
NZ_ABCE01000065
22.6 KB
21 CDS

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whole genome shotgun sequence
NZ_ABCE01000066
22.6 KB
26 CDS

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whole genome shotgun sequence
NZ_ABCE01000067
20.8 KB
17 CDS

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whole genome shotgun sequence
NZ_ABCE01000068
19.9 KB
13 CDS

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whole genome shotgun sequence
NZ_ABCE01000069
19.7 KB
20 CDS

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whole genome shotgun sequence
NZ_ABCE01000070
19.5 KB
16 CDS

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whole genome shotgun sequence
NZ_ABCE01000071
17.4 KB
15 CDS

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whole genome shotgun sequence
NZ_ABCE01000072
17.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ABCE01000073
17.3 KB
16 CDS

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whole genome shotgun sequence
NZ_ABCE01000074
16.3 KB
18 CDS

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whole genome shotgun sequence
NZ_ABCE01000075
14.9 KB
16 CDS

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whole genome shotgun sequence
NZ_ABCE01000076
14.3 KB
14 CDS

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whole genome shotgun sequence
NZ_ABCE01000077
13.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ABCE01000078
13.0 KB
25 CDS

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whole genome shotgun sequence
NZ_ABCE01000079
10.6 KB
14 CDS

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whole genome shotgun sequence
NZ_ABCE01000080
9.5 KB
8 CDS

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whole genome shotgun sequence
NZ_ABCE01000081
9.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ABCE01000082
9.1 KB
9 CDS

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whole genome shotgun sequence
NZ_ABCE01000083
9.0 KB
9 CDS

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whole genome shotgun sequence
NZ_ABCE01000084
8.5 KB
8 CDS

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whole genome shotgun sequence
NZ_ABCE01000085
8.0 KB
6 CDS

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whole genome shotgun sequence
NZ_ABCE01000086
6.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCE01000087
5.5 KB
8 CDS

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whole genome shotgun sequence
NZ_ABCE01000088
3.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000089
2.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCE01000090
2.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCE01000091
2.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCE01000092
2.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ABCE01000093
2.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ABCE01000094
2.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCE01000095
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000096
2.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCE01000097
2.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCE01000098
2.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000099
1.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000100
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCE01000101
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000102
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCE01000103
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000104
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCE01000105
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000106
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCE01000107
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCE01000108
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCE01000109
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000110
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000111
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCE01000112
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCE01000113
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000114
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCE01000115
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCE01000116
1.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABCE01000117
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000118
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000119
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000120
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000121
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCE01000122
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABCE01000123
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000124
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCE01000125
844 bytes
2 CDS

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Taxonomy

External Links

Planctomyces maris DSM 8797

Search Genome

Sequences

PubMed Search for Planctomyces maris DSM 8797

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