Prevotella bergensis DSM 17361

Baylor College of Medicine

GC Content: 47.6%, Released Date: April 20, 2009 #18306

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACKS01000001
523 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000002
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ACKS01000003
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000004
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ACKS01000005
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ACKS01000006
845 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACKS01000007
2.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ACKS01000008
2.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACKS01000009
159.0 KB
128 CDS

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whole genome shotgun sequence
NZ_ACKS01000010
21.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ACKS01000011
20.3 KB
26 CDS

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whole genome shotgun sequence
NZ_ACKS01000012
2.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ACKS01000013
1.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ACKS01000014
41.7 KB
34 CDS

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whole genome shotgun sequence
NZ_ACKS01000015
34.5 KB
30 CDS

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whole genome shotgun sequence
NZ_ACKS01000016
11.4 KB
10 CDS

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whole genome shotgun sequence
NZ_ACKS01000017
57.6 KB
50 CDS

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whole genome shotgun sequence
NZ_ACKS01000018
29.6 KB
24 CDS

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whole genome shotgun sequence
NZ_ACKS01000019
36.4 KB
32 CDS

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whole genome shotgun sequence
NZ_ACKS01000020
45.5 KB
40 CDS

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whole genome shotgun sequence
NZ_ACKS01000021
9.5 KB
13 CDS

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whole genome shotgun sequence
NZ_ACKS01000022
48.2 KB
40 CDS

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whole genome shotgun sequence
NZ_ACKS01000023
13.9 KB
15 CDS

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whole genome shotgun sequence
NZ_ACKS01000024
35.4 KB
34 CDS

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whole genome shotgun sequence
NZ_ACKS01000025
72.9 KB
52 CDS

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whole genome shotgun sequence
NZ_ACKS01000026
15.3 KB
12 CDS

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whole genome shotgun sequence
NZ_ACKS01000027
1.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ACKS01000028
600 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000029
21.4 KB
20 CDS

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whole genome shotgun sequence
NZ_ACKS01000030
31.8 KB
28 CDS

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whole genome shotgun sequence
NZ_ACKS01000031
107.1 KB
93 CDS

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whole genome shotgun sequence
NZ_ACKS01000032
4.5 KB
7 CDS

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whole genome shotgun sequence
NZ_ACKS01000033
25.3 KB
22 CDS

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whole genome shotgun sequence
NZ_ACKS01000034
142.8 KB
118 CDS

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whole genome shotgun sequence
NZ_ACKS01000035
21.2 KB
28 CDS

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whole genome shotgun sequence
NZ_ACKS01000036
26.8 KB
29 CDS

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whole genome shotgun sequence
NZ_ACKS01000037
5.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACKS01000038
10.7 KB
17 CDS

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whole genome shotgun sequence
NZ_ACKS01000039
78.6 KB
74 CDS

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whole genome shotgun sequence
NZ_ACKS01000040
10.0 KB
11 CDS

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whole genome shotgun sequence
NZ_ACKS01000041
4.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACKS01000042
3.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACKS01000043
11.8 KB
6 CDS

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whole genome shotgun sequence
NZ_ACKS01000044
16.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ACKS01000045
96.4 KB
73 CDS

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whole genome shotgun sequence
NZ_ACKS01000046
9.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ACKS01000047
2.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACKS01000048
7.6 KB
9 CDS

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whole genome shotgun sequence
NZ_ACKS01000049
34.0 KB
32 CDS

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whole genome shotgun sequence
NZ_ACKS01000050
2.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ACKS01000051
6.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ACKS01000052
18.0 KB
17 CDS

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whole genome shotgun sequence
NZ_ACKS01000053
29.8 KB
24 CDS

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whole genome shotgun sequence
NZ_ACKS01000054
2.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ACKS01000055
11.4 KB
16 CDS

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whole genome shotgun sequence
NZ_ACKS01000056
58.6 KB
41 CDS

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whole genome shotgun sequence
NZ_ACKS01000057
35.5 KB
28 CDS

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whole genome shotgun sequence
NZ_ACKS01000058
68.7 KB
53 CDS

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whole genome shotgun sequence
NZ_ACKS01000059
4.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ACKS01000060
27.3 KB
29 CDS

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whole genome shotgun sequence
NZ_ACKS01000061
38.7 KB
34 CDS

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whole genome shotgun sequence
NZ_ACKS01000062
17.6 KB
14 CDS

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whole genome shotgun sequence
NZ_ACKS01000063
21.9 KB
13 CDS

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whole genome shotgun sequence
NZ_ACKS01000064
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000065
697 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000066
40.1 KB
33 CDS

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whole genome shotgun sequence
NZ_ACKS01000067
63.2 KB
56 CDS

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whole genome shotgun sequence
NZ_ACKS01000068
18.6 KB
20 CDS

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whole genome shotgun sequence
NZ_ACKS01000069
16.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ACKS01000070
74.3 KB
73 CDS

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whole genome shotgun sequence
NZ_ACKS01000071
89.2 KB
70 CDS

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whole genome shotgun sequence
NZ_ACKS01000072
81.2 KB
83 CDS

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whole genome shotgun sequence
NZ_ACKS01000073
65.6 KB
65 CDS

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whole genome shotgun sequence
NZ_ACKS01000074
11.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ACKS01000075
8.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ACKS01000076
29.1 KB
23 CDS

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whole genome shotgun sequence
NZ_ACKS01000077
69.5 KB
63 CDS

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whole genome shotgun sequence
NZ_ACKS01000078
62.8 KB
57 CDS

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whole genome shotgun sequence
NZ_ACKS01000079
43.3 KB
49 CDS

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whole genome shotgun sequence
NZ_ACKS01000080
39.2 KB
33 CDS

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whole genome shotgun sequence
NZ_ACKS01000081
85.4 KB
58 CDS

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whole genome shotgun sequence
NZ_ACKS01000082
154.9 KB
124 CDS

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whole genome shotgun sequence
NZ_ACKS01000083
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ACKS01000084
41.8 KB
35 CDS

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whole genome shotgun sequence
NZ_ACKS01000085
71.8 KB
76 CDS

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whole genome shotgun sequence
NZ_ACKS01000086
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000087
1011 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000088
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000089
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000090
2.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACKS01000091
31.5 KB
36 CDS

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whole genome shotgun sequence
NZ_ACKS01000092
683 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000093
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ACKS01000094
709 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000095
41.7 KB
44 CDS

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whole genome shotgun sequence
NZ_ACKS01000096
745 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000097
520 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000098
1.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ACKS01000099
521 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000100
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACKS01000101
2.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACKS01000102
666 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACKS01000103
18.1 KB
16 CDS

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whole genome shotgun sequence
NZ_ACKS01000104
4.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACKS01000105
8.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ACKS01000106
19.1 KB
17 CDS

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whole genome shotgun sequence
NZ_ACKS01000107
32.8 KB
47 CDS

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whole genome shotgun sequence
NZ_ACKS01000108
66.3 KB
67 CDS

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whole genome shotgun sequence
NZ_ACKS01000109
65.0 KB
71 CDS

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whole genome shotgun sequence
NZ_ACKS01000110
25.4 KB
29 CDS

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whole genome shotgun sequence
NZ_ACKS01000111
13.3 KB
12 CDS

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whole genome shotgun sequence
NZ_ACKS01000112
24.8 KB
17 CDS

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Taxonomy

External Links

Prevotella bergensis DSM 17361

Search Genome

Sequences

PubMed Search for Prevotella bergensis DSM 17361

Related Genomes