Prevotella bryantii B14

J. Craig Venter Institute

Genome Size: 3.6 megabases, Released Date: June 28, 2010 #20535

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig_019, whole genome shotgun sequence
NZ_ADWO01000001
2.8 KB
4 CDS

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contig_069, whole genome shotgun sequence
NZ_ADWO01000002
43.0 KB
38 CDS

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contig_093, whole genome shotgun sequence
NZ_ADWO01000003
17.1 KB
12 CDS

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contig_051, whole genome shotgun sequence
NZ_ADWO01000004
14.2 KB
7 CDS

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contig_063, whole genome shotgun sequence
NZ_ADWO01000005
10.3 KB
6 CDS

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contig_033, whole genome shotgun sequence
NZ_ADWO01000006
53.9 KB
30 CDS

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contig_031, whole genome shotgun sequence
NZ_ADWO01000007
2.0 KB
2 CDS

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contig_124, whole genome shotgun sequence
NZ_ADWO01000008
19.6 KB
21 CDS

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contig_046, whole genome shotgun sequence
NZ_ADWO01000009
38.7 KB
28 CDS

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contig_123, whole genome shotgun sequence
NZ_ADWO01000010
60.2 KB
56 CDS

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contig_035, whole genome shotgun sequence
NZ_ADWO01000011
10.2 KB
9 CDS

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contig_054, whole genome shotgun sequence
NZ_ADWO01000012
2.4 KB
4 CDS

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contig_096, whole genome shotgun sequence
NZ_ADWO01000013
53.7 KB
49 CDS

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contig_086, whole genome shotgun sequence
NZ_ADWO01000014
66.1 KB
56 CDS

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contig_098, whole genome shotgun sequence
NZ_ADWO01000015
117.1 KB
79 CDS

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contig_129, whole genome shotgun sequence
NZ_ADWO01000016
9.5 KB
10 CDS

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contig_064, whole genome shotgun sequence
NZ_ADWO01000017
27.8 KB
16 CDS

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contig_099, whole genome shotgun sequence
NZ_ADWO01000018
25.7 KB
21 CDS

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contig_114, whole genome shotgun sequence
NZ_ADWO01000019
109.9 KB
92 CDS

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contig_025, whole genome shotgun sequence
NZ_ADWO01000020
120.8 KB
78 CDS

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contig_111, whole genome shotgun sequence
NZ_ADWO01000021
5.8 KB
5 CDS

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contig_115, whole genome shotgun sequence
NZ_ADWO01000022
52.0 KB
33 CDS

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contig_045, whole genome shotgun sequence
NZ_ADWO01000023
2.1 KB
2 CDS

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contig_090, whole genome shotgun sequence
NZ_ADWO01000024
8.8 KB
11 CDS

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contig_070, whole genome shotgun sequence
NZ_ADWO01000025
4.9 KB
6 CDS

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contig_106, whole genome shotgun sequence
NZ_ADWO01000026
111.0 KB
93 CDS

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contig_071, whole genome shotgun sequence
NZ_ADWO01000027
2.2 KB
2 CDS

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contig_014, whole genome shotgun sequence
NZ_ADWO01000028
24.4 KB
13 CDS

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contig_022, whole genome shotgun sequence
NZ_ADWO01000029
12.7 KB
8 CDS

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contig_079, whole genome shotgun sequence
NZ_ADWO01000030
34.0 KB
13 CDS

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contig_012, whole genome shotgun sequence
NZ_ADWO01000031
26.5 KB
21 CDS

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contig_006, whole genome shotgun sequence
NZ_ADWO01000032
2.4 KB
2 CDS

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contig_112, whole genome shotgun sequence
NZ_ADWO01000033
18.2 KB
16 CDS

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contig_087, whole genome shotgun sequence
NZ_ADWO01000034
3.8 KB
4 CDS

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contig_066, whole genome shotgun sequence
NZ_ADWO01000035
13.4 KB
7 CDS

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contig_073, whole genome shotgun sequence
NZ_ADWO01000036
8.3 KB
5 CDS

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contig_102, whole genome shotgun sequence
NZ_ADWO01000037
20.5 KB
13 CDS

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contig_061, whole genome shotgun sequence
NZ_ADWO01000038
56.8 KB
33 CDS

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contig_092, whole genome shotgun sequence
NZ_ADWO01000039
3.2 KB
2 CDS

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contig_074, whole genome shotgun sequence
NZ_ADWO01000040
23.8 KB
20 CDS

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contig_116, whole genome shotgun sequence
NZ_ADWO01000041
31.8 KB
32 CDS

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contig_100, whole genome shotgun sequence
NZ_ADWO01000042
129.1 KB
108 CDS

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contig_021, whole genome shotgun sequence
NZ_ADWO01000043
10.3 KB
7 CDS

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contig_095, whole genome shotgun sequence
NZ_ADWO01000044
43.8 KB
40 CDS

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contig_067, whole genome shotgun sequence
NZ_ADWO01000045
6.6 KB
2 CDS

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contig_131, whole genome shotgun sequence
NZ_ADWO01000046
2.3 KB
1 CDS

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contig_103, whole genome shotgun sequence
NZ_ADWO01000047
30.9 KB
20 CDS

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contig_060, whole genome shotgun sequence
NZ_ADWO01000048
37.5 KB
24 CDS

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contig_044, whole genome shotgun sequence
NZ_ADWO01000049
15.6 KB
18 CDS

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contig_133, whole genome shotgun sequence
NZ_ADWO01000050
2.3 KB
0 CDS

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contig_010, whole genome shotgun sequence
NZ_ADWO01000051
6.2 KB
2 CDS

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contig_105, whole genome shotgun sequence
NZ_ADWO01000052
50.3 KB
34 CDS

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contig_108, whole genome shotgun sequence
NZ_ADWO01000053
178.5 KB
143 CDS

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contig_040, whole genome shotgun sequence
NZ_ADWO01000054
12.8 KB
13 CDS

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contig_088, whole genome shotgun sequence
NZ_ADWO01000055
27.4 KB
23 CDS

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contig_110, whole genome shotgun sequence
NZ_ADWO01000056
103.2 KB
85 CDS

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contig_094, whole genome shotgun sequence
NZ_ADWO01000057
2.1 KB
3 CDS

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contig_119, whole genome shotgun sequence
NZ_ADWO01000058
116.6 KB
99 CDS

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contig_005, whole genome shotgun sequence
NZ_ADWO01000059
2.3 KB
3 CDS

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contig_083, whole genome shotgun sequence
NZ_ADWO01000060
2.1 KB
2 CDS

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contig_065, whole genome shotgun sequence
NZ_ADWO01000061
56.5 KB
47 CDS

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contig_016, whole genome shotgun sequence
NZ_ADWO01000062
9.0 KB
11 CDS

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contig_001, whole genome shotgun sequence
NZ_ADWO01000063
109.8 KB
88 CDS

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contig_037, whole genome shotgun sequence
NZ_ADWO01000064
28.3 KB
24 CDS

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contig_008, whole genome shotgun sequence
NZ_ADWO01000065
48.1 KB
43 CDS

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contig_020, whole genome shotgun sequence
NZ_ADWO01000066
79.1 KB
49 CDS

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contig_047, whole genome shotgun sequence
NZ_ADWO01000067
14.1 KB
11 CDS

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contig_109, whole genome shotgun sequence
NZ_ADWO01000068
82.4 KB
63 CDS

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contig_027, whole genome shotgun sequence
NZ_ADWO01000069
2.1 KB
2 CDS

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contig_003, whole genome shotgun sequence
NZ_ADWO01000070
7.5 KB
7 CDS

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contig_009, whole genome shotgun sequence
NZ_ADWO01000071
5.9 KB
6 CDS

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contig_104, whole genome shotgun sequence
NZ_ADWO01000072
41.1 KB
34 CDS

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contig_043, whole genome shotgun sequence
NZ_ADWO01000073
23.9 KB
18 CDS

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contig_089, whole genome shotgun sequence
NZ_ADWO01000074
33.0 KB
31 CDS

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contig_113, whole genome shotgun sequence
NZ_ADWO01000075
41.4 KB
31 CDS

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contig_118, whole genome shotgun sequence
NZ_ADWO01000076
129.0 KB
109 CDS

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contig_081, whole genome shotgun sequence
NZ_ADWO01000077
5.4 KB
3 CDS

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contig_034, whole genome shotgun sequence
NZ_ADWO01000078
8.9 KB
8 CDS

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contig_107, whole genome shotgun sequence
NZ_ADWO01000079
21.2 KB
17 CDS

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contig_068, whole genome shotgun sequence
NZ_ADWO01000080
2.1 KB
3 CDS

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contig_120, whole genome shotgun sequence
NZ_ADWO01000081
80.7 KB
59 CDS

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contig_075, whole genome shotgun sequence
NZ_ADWO01000082
33.3 KB
27 CDS

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contig_117, whole genome shotgun sequence
NZ_ADWO01000083
68.1 KB
59 CDS

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contig_085, whole genome shotgun sequence
NZ_ADWO01000084
2.2 KB
3 CDS

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contig_121, whole genome shotgun sequence
NZ_ADWO01000085
17.8 KB
18 CDS

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contig_039, whole genome shotgun sequence
NZ_ADWO01000086
103.1 KB
84 CDS

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contig_076, whole genome shotgun sequence
NZ_ADWO01000087
7.4 KB
2 CDS

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contig_036, whole genome shotgun sequence
NZ_ADWO01000088
34.9 KB
31 CDS

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contig_122, whole genome shotgun sequence
NZ_ADWO01000089
20.3 KB
14 CDS

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contig_011, whole genome shotgun sequence
NZ_ADWO01000090
18.7 KB
13 CDS

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contig_026, whole genome shotgun sequence
NZ_ADWO01000091
10.8 KB
8 CDS

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contig_072, whole genome shotgun sequence
NZ_ADWO01000092
74.8 KB
84 CDS

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contig_080, whole genome shotgun sequence
NZ_ADWO01000093
12.8 KB
5 CDS

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contig_018, whole genome shotgun sequence
NZ_ADWO01000094
28.3 KB
20 CDS

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contig_013, whole genome shotgun sequence
NZ_ADWO01000095
66.8 KB
61 CDS

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contig_059, whole genome shotgun sequence
NZ_ADWO01000096
111.2 KB
86 CDS

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contig_002, whole genome shotgun sequence
NZ_ADWO01000097
11.9 KB
12 CDS

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contig_055, whole genome shotgun sequence
NZ_ADWO01000098
5.4 KB
3 CDS

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References

Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche
Purushe,J., Fouts,D.E., Morrison,M., White,B.A., Mackie,R.I., Coutinho,P.M., Henrissat,B. and Nelson,K.E. Microb. Ecol. 60 (4), 721-729 (2010)
PubMed, PubGet, HubMed

Taxonomy

External Links

Prevotella bryantii B14

Search Genome

Sequences

References

Related Genomes