Prevotella buccalis ATCC 35310

J. Craig Venter Institute

Genome Size: 3.0 megabases, GC Content: 45.3%, Released Date: Dec. 15, 2009 #20538

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ADEG01000001
2.7 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000002
47.3 KB
38 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000003
772 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000004
16.8 KB
15 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000005
19.2 KB
15 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000006
4.7 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000007
555 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000008
26.7 KB
15 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000009
49.1 KB
48 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000010
673 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000011
27.3 KB
20 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000012
78.0 KB
67 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000013
16.6 KB
15 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000014
979 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000015
2.6 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000016
86.3 KB
75 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000017
5.5 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000018
8.0 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000019
1.6 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000020
728 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000021
2.1 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000022
37.3 KB
34 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000023
35.4 KB
27 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000024
994 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000025
5.8 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000026
1.7 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000027
770 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000028
2.6 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000029
1.8 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000030
51.1 KB
32 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000031
103.4 KB
99 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000032
1.3 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000033
8.7 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000034
9.8 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000035
24.4 KB
27 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000036
44.9 KB
33 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000037
5.1 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000038
5.0 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000039
218.8 KB
195 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000040
706 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000041
59.4 KB
57 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000042
66.3 KB
46 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000043
23.2 KB
16 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000044
5.9 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000045
144.5 KB
112 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000046
68.4 KB
52 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000047
1.2 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000048
9.5 KB
8 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000049
23.5 KB
19 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000050
826 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000051
7.5 KB
10 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000052
4.5 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000053
16.6 KB
25 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000054
3.2 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000055
522 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000056
1.6 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000057
45.9 KB
35 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000058
157.2 KB
123 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000059
4.9 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000060
18.0 KB
12 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000061
1.1 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000062
91.7 KB
65 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000063
7.9 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000064
2.0 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000065
1.1 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000066
27.2 KB
17 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000067
1.2 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000068
103.6 KB
69 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000069
709 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000070
4.0 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000071
7.6 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000072
5.6 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000073
85.3 KB
76 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000074
1.0 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000075
3.0 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000076
5.6 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000077
773 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000078
23.9 KB
20 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000079
2.9 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000080
14.6 KB
10 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000081
667 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000082
508 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000083
540 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000084
12.4 KB
14 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000085
45.9 KB
38 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000086
118.8 KB
114 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000087
89.2 KB
67 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000088
8.0 KB
7 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000089
773 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000090
152.5 KB
120 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000091
1.0 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000092
40.7 KB
36 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000093
1.0 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000094
72.8 KB
57 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000095
44.8 KB
33 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000096
35.6 KB
33 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000097
13.5 KB
12 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000098
8.0 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000099
37.2 KB
24 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000100
3.4 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000101
3.1 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000102
1.3 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000103
4.0 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000104
32.4 KB
26 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000105
785 bytes
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000106
634 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000107
11.4 KB
15 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000108
1.6 KB
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000109
46.2 KB
39 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000110
54.4 KB
44 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000111
46.2 KB
38 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000112
3.3 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000113
12.1 KB
19 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000114
3.7 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000115
1.5 KB
1 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000116
14.7 KB
11 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000117
16.5 KB
13 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ADEG01000118
10.9 KB
9 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Prevotella buccalis ATCC 35310

Search Genome

Sequences

PubMed Search for Prevotella buccalis ATCC 35310

Related Genomes