Prevotella oralis ATCC 33269

Baylor College of Medicine

Released Date: Dec. 21, 2010 #20542

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00002, whole genome shotgun sequence
NZ_AEPE01000001
774 bytes
1 CDS

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contig00008, whole genome shotgun sequence
NZ_AEPE01000002
138.6 KB
130 CDS

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contig00009, whole genome shotgun sequence
NZ_AEPE01000003
50.1 KB
46 CDS

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contig00010, whole genome shotgun sequence
NZ_AEPE01000004
34.7 KB
48 CDS

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contig00011, whole genome shotgun sequence
NZ_AEPE01000005
4.9 KB
3 CDS

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contig00012, whole genome shotgun sequence
NZ_AEPE01000006
30.5 KB
32 CDS

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contig00013, whole genome shotgun sequence
NZ_AEPE01000007
43.2 KB
38 CDS

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contig00014, whole genome shotgun sequence
NZ_AEPE01000008
53.9 KB
47 CDS

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contig00015, whole genome shotgun sequence
NZ_AEPE01000009
197.4 KB
175 CDS

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contig00016, whole genome shotgun sequence
NZ_AEPE01000010
174.7 KB
168 CDS

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contig00017, whole genome shotgun sequence
NZ_AEPE01000011
18.2 KB
15 CDS

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contig00018, whole genome shotgun sequence
NZ_AEPE01000012
86.0 KB
73 CDS

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contig00019, whole genome shotgun sequence
NZ_AEPE01000013
12.5 KB
6 CDS

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contig00020, whole genome shotgun sequence
NZ_AEPE01000014
147.9 KB
133 CDS

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contig00021, whole genome shotgun sequence
NZ_AEPE01000015
103.3 KB
97 CDS

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contig00022, whole genome shotgun sequence
NZ_AEPE01000016
233.2 KB
212 CDS

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contig00023, whole genome shotgun sequence
NZ_AEPE01000017
91.8 KB
72 CDS

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contig00024, whole genome shotgun sequence
NZ_AEPE01000018
11.6 KB
13 CDS

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contig00025, whole genome shotgun sequence
NZ_AEPE01000019
188.8 KB
182 CDS

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contig00026, whole genome shotgun sequence
NZ_AEPE01000020
834.2 KB
730 CDS

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contig00027, whole genome shotgun sequence
NZ_AEPE01000021
5.7 KB
0 CDS

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contig00028, whole genome shotgun sequence
NZ_AEPE01000022
44.4 KB
43 CDS

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contig00029, whole genome shotgun sequence
NZ_AEPE01000023
234.0 KB
202 CDS

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contig00036, whole genome shotgun sequence
NZ_AEPE01000024
2.1 KB
3 CDS

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contig00037, whole genome shotgun sequence
NZ_AEPE01000025
532 bytes
1 CDS

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contig00039, whole genome shotgun sequence
NZ_AEPE01000026
2.6 KB
3 CDS

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contig00040, whole genome shotgun sequence
NZ_AEPE01000027
787 bytes
1 CDS

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Taxonomy

External Links

Prevotella oralis ATCC 33269

Search Genome

Sequences

PubMed Search for Prevotella oralis ATCC 33269

Related Genomes