Prevotella timonensis CRIS 5C-B1

J. Craig Venter Institute

Genome Size: 2.8 megabases, GC Content: 42.2%, Released Date: Dec. 15, 2009 #20548

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ADEF01000001
37.3 KB
37 CDS

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whole genome shotgun sequence
NZ_ADEF01000002
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000003
854 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000004
184.4 KB
152 CDS

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whole genome shotgun sequence
NZ_ADEF01000005
156.3 KB
125 CDS

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whole genome shotgun sequence
NZ_ADEF01000006
41.6 KB
32 CDS

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whole genome shotgun sequence
NZ_ADEF01000007
16.5 KB
11 CDS

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whole genome shotgun sequence
NZ_ADEF01000008
63.4 KB
58 CDS

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whole genome shotgun sequence
NZ_ADEF01000009
675 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000010
35.9 KB
28 CDS

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whole genome shotgun sequence
NZ_ADEF01000011
35.4 KB
30 CDS

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whole genome shotgun sequence
NZ_ADEF01000012
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ADEF01000013
93.2 KB
94 CDS

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whole genome shotgun sequence
NZ_ADEF01000014
4.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ADEF01000015
174.4 KB
135 CDS

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whole genome shotgun sequence
NZ_ADEF01000016
18.8 KB
16 CDS

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whole genome shotgun sequence
NZ_ADEF01000017
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000018
39.6 KB
38 CDS

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whole genome shotgun sequence
NZ_ADEF01000019
28.7 KB
25 CDS

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whole genome shotgun sequence
NZ_ADEF01000020
2.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ADEF01000021
74.2 KB
56 CDS

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whole genome shotgun sequence
NZ_ADEF01000022
937 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADEF01000023
12.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ADEF01000024
99.7 KB
64 CDS

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whole genome shotgun sequence
NZ_ADEF01000025
687 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADEF01000026
724 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000027
12.9 KB
13 CDS

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whole genome shotgun sequence
NZ_ADEF01000028
209.3 KB
153 CDS

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whole genome shotgun sequence
NZ_ADEF01000029
66.2 KB
53 CDS

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whole genome shotgun sequence
NZ_ADEF01000030
8.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ADEF01000031
11.3 KB
13 CDS

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whole genome shotgun sequence
NZ_ADEF01000032
12.2 KB
11 CDS

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whole genome shotgun sequence
NZ_ADEF01000033
57.9 KB
44 CDS

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whole genome shotgun sequence
NZ_ADEF01000034
20.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ADEF01000035
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ADEF01000036
5.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ADEF01000037
505 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADEF01000038
3.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ADEF01000039
98.6 KB
82 CDS

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whole genome shotgun sequence
NZ_ADEF01000040
1000 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADEF01000041
10.1 KB
7 CDS

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whole genome shotgun sequence
NZ_ADEF01000042
60.1 KB
50 CDS

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whole genome shotgun sequence
NZ_ADEF01000043
4.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000044
117.2 KB
103 CDS

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whole genome shotgun sequence
NZ_ADEF01000045
45.1 KB
42 CDS

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whole genome shotgun sequence
NZ_ADEF01000046
7.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ADEF01000047
16.3 KB
15 CDS

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whole genome shotgun sequence
NZ_ADEF01000048
253.7 KB
186 CDS

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whole genome shotgun sequence
NZ_ADEF01000049
34.4 KB
26 CDS

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whole genome shotgun sequence
NZ_ADEF01000050
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ADEF01000051
16.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ADEF01000052
8.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ADEF01000053
5.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ADEF01000054
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000055
39.5 KB
30 CDS

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whole genome shotgun sequence
NZ_ADEF01000056
45.6 KB
38 CDS

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whole genome shotgun sequence
NZ_ADEF01000057
23.7 KB
17 CDS

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whole genome shotgun sequence
NZ_ADEF01000058
3.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ADEF01000059
25.3 KB
24 CDS

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whole genome shotgun sequence
NZ_ADEF01000060
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000061
56.5 KB
42 CDS

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whole genome shotgun sequence
NZ_ADEF01000062
530 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000063
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000064
12.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ADEF01000065
51.7 KB
41 CDS

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whole genome shotgun sequence
NZ_ADEF01000066
101.2 KB
82 CDS

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whole genome shotgun sequence
NZ_ADEF01000067
749 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADEF01000068
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000069
5.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ADEF01000070
517 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADEF01000071
764 bytes
1 CDS

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whole genome shotgun sequence
NZ_ADEF01000072
139.5 KB
121 CDS

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Taxonomy

External Links

Prevotella timonensis CRIS 5C-B1

Search Genome

Sequences

PubMed Search for Prevotella timonensis CRIS 5C-B1

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