Prevotella veroralis F0319

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

Released Date: Aug. 11, 2009 #18311

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACVA01000001
6.0 KB
6 CDS

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whole genome shotgun sequence
NZ_ACVA01000002
35.3 KB
42 CDS

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whole genome shotgun sequence
NZ_ACVA01000003
39.3 KB
42 CDS

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whole genome shotgun sequence
NZ_ACVA01000004
25.4 KB
38 CDS

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whole genome shotgun sequence
NZ_ACVA01000005
23.4 KB
21 CDS

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whole genome shotgun sequence
NZ_ACVA01000006
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000007
97.0 KB
93 CDS

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whole genome shotgun sequence
NZ_ACVA01000008
33.3 KB
42 CDS

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whole genome shotgun sequence
NZ_ACVA01000009
2.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ACVA01000010
4.5 KB
8 CDS

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whole genome shotgun sequence
NZ_ACVA01000011
15.3 KB
22 CDS

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whole genome shotgun sequence
NZ_ACVA01000012
543 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000013
362.5 KB
372 CDS

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whole genome shotgun sequence
NZ_ACVA01000014
499 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000015
932 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000016
138.1 KB
127 CDS

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whole genome shotgun sequence
NZ_ACVA01000017
1019 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000018
42.5 KB
45 CDS

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whole genome shotgun sequence
NZ_ACVA01000019
105.0 KB
116 CDS

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whole genome shotgun sequence
NZ_ACVA01000020
7.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ACVA01000021
95.7 KB
103 CDS

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whole genome shotgun sequence
NZ_ACVA01000022
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000023
487 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000024
625 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000025
858 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000026
255 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000027
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000028
343 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000029
613 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000030
39.9 KB
42 CDS

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whole genome shotgun sequence
NZ_ACVA01000031
337.7 KB
317 CDS

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whole genome shotgun sequence
NZ_ACVA01000032
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000033
91.3 KB
89 CDS

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whole genome shotgun sequence
NZ_ACVA01000034
682 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000035
2.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ACVA01000036
152.3 KB
141 CDS

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whole genome shotgun sequence
NZ_ACVA01000037
871 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000038
587 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000039
38.3 KB
35 CDS

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whole genome shotgun sequence
NZ_ACVA01000040
30.1 KB
28 CDS

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whole genome shotgun sequence
NZ_ACVA01000041
23.5 KB
24 CDS

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whole genome shotgun sequence
NZ_ACVA01000042
842 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000043
15.9 KB
13 CDS

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whole genome shotgun sequence
NZ_ACVA01000044
436 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000045
46.0 KB
43 CDS

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whole genome shotgun sequence
NZ_ACVA01000046
412 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000047
143.0 KB
145 CDS

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whole genome shotgun sequence
NZ_ACVA01000048
120.0 KB
131 CDS

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whole genome shotgun sequence
NZ_ACVA01000049
99.3 KB
108 CDS

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whole genome shotgun sequence
NZ_ACVA01000050
552 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000051
939 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000052
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000053
55.8 KB
51 CDS

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whole genome shotgun sequence
NZ_ACVA01000054
613 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000055
23.0 KB
28 CDS

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whole genome shotgun sequence
NZ_ACVA01000056
616 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000057
45.7 KB
57 CDS

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whole genome shotgun sequence
NZ_ACVA01000058
43.8 KB
52 CDS

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whole genome shotgun sequence
NZ_ACVA01000059
12.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ACVA01000060
588 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000061
23.1 KB
31 CDS

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whole genome shotgun sequence
NZ_ACVA01000062
822 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000063
32.0 KB
53 CDS

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whole genome shotgun sequence
NZ_ACVA01000064
28.7 KB
33 CDS

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whole genome shotgun sequence
NZ_ACVA01000065
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACVA01000066
44.1 KB
53 CDS

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whole genome shotgun sequence
NZ_ACVA01000067
99.2 KB
98 CDS

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whole genome shotgun sequence
NZ_ACVA01000068
10.3 KB
11 CDS

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whole genome shotgun sequence
NZ_ACVA01000069
26.3 KB
25 CDS

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whole genome shotgun sequence
NZ_ACVA01000070
937 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000071
859 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000072
110.5 KB
111 CDS

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whole genome shotgun sequence
NZ_ACVA01000073
45.8 KB
49 CDS

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whole genome shotgun sequence
NZ_ACVA01000074
729 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000075
461 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000076
77.5 KB
77 CDS

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whole genome shotgun sequence
NZ_ACVA01000077
515 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000078
20.4 KB
26 CDS

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whole genome shotgun sequence
NZ_ACVA01000079
4.4 KB
7 CDS

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whole genome shotgun sequence
NZ_ACVA01000080
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000081
681 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACVA01000082
300 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000083
918 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000084
922 bytes
3 CDS

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whole genome shotgun sequence
NZ_ACVA01000085
435 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000086
707 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000087
673 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000088
658 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000089
608 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000090
546 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000091
890 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000092
801 bytes
4 CDS

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whole genome shotgun sequence
NZ_ACVA01000093
528 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000094
713 bytes
3 CDS

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whole genome shotgun sequence
NZ_ACVA01000095
690 bytes
3 CDS

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whole genome shotgun sequence
NZ_ACVA01000096
654 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACVA01000097
525 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACVA01000098
508 bytes
1 CDS

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Taxonomy

External Links

Prevotella veroralis F0319

Search Genome

Sequences

PubMed Search for Prevotella veroralis F0319

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