Rickettsia bellii RML369-C

CNRS

Genome Size: 1.52 megabases, GC Content: 31.6%, Released Date: April 5, 2006 #17382

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

complete genome
NC_007940
1.5 MB
1429 CDS

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References

Genome sequence of Rickettsia bellii illuminates the role of amoebae in gene exchanges between intracellular pathogens
Ogata,H., La Scola,B., Audic,S., Renesto,P., Blanc,G., Robert,C., Fournier,P.E., Claverie,J.M. and Raoult,D. PLoS Genet. 2 (5), E76 (2006)
PubMed, PubGet, HubMed

Taxonomy

External Links

Rickettsia bellii RML369-C

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Sequences

References

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