Roseburia inulinivorans DSM 16841

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 41.9%, Released Date: March 12, 2009 #18346

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACFY01000001
8.1 KB
10 CDS

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whole genome shotgun sequence
NZ_ACFY01000002
742 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000003
106.0 KB
122 CDS

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whole genome shotgun sequence
NZ_ACFY01000004
60.1 KB
56 CDS

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whole genome shotgun sequence
NZ_ACFY01000005
3.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000006
2.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000007
8.1 KB
14 CDS

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whole genome shotgun sequence
NZ_ACFY01000008
14.8 KB
18 CDS

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whole genome shotgun sequence
NZ_ACFY01000009
8.1 KB
9 CDS

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whole genome shotgun sequence
NZ_ACFY01000010
4.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ACFY01000011
9.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ACFY01000012
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACFY01000013
12.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ACFY01000014
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000015
8.5 KB
14 CDS

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whole genome shotgun sequence
NZ_ACFY01000016
17.5 KB
20 CDS

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whole genome shotgun sequence
NZ_ACFY01000017
25.1 KB
28 CDS

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whole genome shotgun sequence
NZ_ACFY01000018
11.6 KB
10 CDS

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whole genome shotgun sequence
NZ_ACFY01000019
3.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000020
24.0 KB
24 CDS

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whole genome shotgun sequence
NZ_ACFY01000021
74.1 KB
73 CDS

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whole genome shotgun sequence
NZ_ACFY01000022
38.6 KB
35 CDS

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whole genome shotgun sequence
NZ_ACFY01000023
40.6 KB
43 CDS

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whole genome shotgun sequence
NZ_ACFY01000024
19.2 KB
19 CDS

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whole genome shotgun sequence
NZ_ACFY01000025
5.6 KB
9 CDS

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whole genome shotgun sequence
NZ_ACFY01000026
30.3 KB
32 CDS

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whole genome shotgun sequence
NZ_ACFY01000027
2.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000028
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000029
631 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000030
18.3 KB
22 CDS

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whole genome shotgun sequence
NZ_ACFY01000031
83.8 KB
96 CDS

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whole genome shotgun sequence
NZ_ACFY01000032
19.8 KB
29 CDS

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whole genome shotgun sequence
NZ_ACFY01000033
37.5 KB
44 CDS

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whole genome shotgun sequence
NZ_ACFY01000034
4.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ACFY01000035
546 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000036
9.8 KB
10 CDS

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whole genome shotgun sequence
NZ_ACFY01000037
18.1 KB
20 CDS

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whole genome shotgun sequence
NZ_ACFY01000038
9.6 KB
9 CDS

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whole genome shotgun sequence
NZ_ACFY01000039
69.5 KB
75 CDS

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whole genome shotgun sequence
NZ_ACFY01000040
89.7 KB
103 CDS

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whole genome shotgun sequence
NZ_ACFY01000041
12.1 KB
15 CDS

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whole genome shotgun sequence
NZ_ACFY01000042
16.8 KB
20 CDS

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whole genome shotgun sequence
NZ_ACFY01000043
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000044
19.1 KB
22 CDS

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whole genome shotgun sequence
NZ_ACFY01000045
1.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ACFY01000046
602 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000047
7.5 KB
11 CDS

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whole genome shotgun sequence
NZ_ACFY01000048
30.4 KB
41 CDS

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whole genome shotgun sequence
NZ_ACFY01000049
891 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000050
15.0 KB
17 CDS

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whole genome shotgun sequence
NZ_ACFY01000051
22.8 KB
29 CDS

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whole genome shotgun sequence
NZ_ACFY01000052
68.9 KB
81 CDS

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whole genome shotgun sequence
NZ_ACFY01000053
29.5 KB
41 CDS

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whole genome shotgun sequence
NZ_ACFY01000054
45.7 KB
46 CDS

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whole genome shotgun sequence
NZ_ACFY01000055
22.1 KB
21 CDS

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whole genome shotgun sequence
NZ_ACFY01000056
3.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ACFY01000057
66.2 KB
75 CDS

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whole genome shotgun sequence
NZ_ACFY01000058
87.1 KB
87 CDS

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whole genome shotgun sequence
NZ_ACFY01000059
30.0 KB
27 CDS

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whole genome shotgun sequence
NZ_ACFY01000060
35.8 KB
41 CDS

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whole genome shotgun sequence
NZ_ACFY01000061
40.6 KB
57 CDS

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whole genome shotgun sequence
NZ_ACFY01000062
67.6 KB
78 CDS

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whole genome shotgun sequence
NZ_ACFY01000063
4.4 KB
8 CDS

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whole genome shotgun sequence
NZ_ACFY01000064
5.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ACFY01000065
15.4 KB
15 CDS

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whole genome shotgun sequence
NZ_ACFY01000066
538 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000067
2.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACFY01000068
523 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000069
36.6 KB
43 CDS

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whole genome shotgun sequence
NZ_ACFY01000070
559 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000071
513 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000072
516 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACFY01000073
505 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000074
511 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000075
505 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000076
551 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACFY01000077
531 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000078
791 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000079
541 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000080
543 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000081
502 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000082
507 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACFY01000083
719 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000084
107.9 KB
112 CDS

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whole genome shotgun sequence
NZ_ACFY01000085
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000086
127.9 KB
156 CDS

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whole genome shotgun sequence
NZ_ACFY01000087
41.9 KB
48 CDS

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whole genome shotgun sequence
NZ_ACFY01000088
25.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ACFY01000089
46.8 KB
37 CDS

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whole genome shotgun sequence
NZ_ACFY01000090
606 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000091
104.7 KB
113 CDS

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whole genome shotgun sequence
NZ_ACFY01000092
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000093
26.7 KB
30 CDS

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whole genome shotgun sequence
NZ_ACFY01000094
62.6 KB
80 CDS

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whole genome shotgun sequence
NZ_ACFY01000095
52.0 KB
50 CDS

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whole genome shotgun sequence
NZ_ACFY01000096
128.5 KB
125 CDS

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whole genome shotgun sequence
NZ_ACFY01000097
20.6 KB
19 CDS

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whole genome shotgun sequence
NZ_ACFY01000098
21.4 KB
22 CDS

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whole genome shotgun sequence
NZ_ACFY01000099
12.1 KB
17 CDS

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whole genome shotgun sequence
NZ_ACFY01000100
5.8 KB
6 CDS

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whole genome shotgun sequence
NZ_ACFY01000101
13.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ACFY01000102
6.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ACFY01000103
8.7 KB
8 CDS

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whole genome shotgun sequence
NZ_ACFY01000104
99.5 KB
105 CDS

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whole genome shotgun sequence
NZ_ACFY01000105
976 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000106
10.2 KB
12 CDS

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whole genome shotgun sequence
NZ_ACFY01000107
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000108
678 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000109
9.3 KB
10 CDS

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whole genome shotgun sequence
NZ_ACFY01000110
41.2 KB
46 CDS

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whole genome shotgun sequence
NZ_ACFY01000111
4.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ACFY01000112
12.0 KB
13 CDS

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whole genome shotgun sequence
NZ_ACFY01000113
68.1 KB
85 CDS

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whole genome shotgun sequence
NZ_ACFY01000114
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000115
17.3 KB
19 CDS

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whole genome shotgun sequence
NZ_ACFY01000116
4.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ACFY01000117
44.7 KB
50 CDS

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whole genome shotgun sequence
NZ_ACFY01000118
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000119
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000120
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000121
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000122
6.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ACFY01000123
523 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000124
2.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ACFY01000125
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000126
3.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ACFY01000127
13.6 KB
13 CDS

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whole genome shotgun sequence
NZ_ACFY01000128
1.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ACFY01000129
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000130
703 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACFY01000131
542 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACFY01000132
20.0 KB
20 CDS

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whole genome shotgun sequence
NZ_ACFY01000133
5.8 KB
10 CDS

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whole genome shotgun sequence
NZ_ACFY01000134
2.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ACFY01000135
5.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ACFY01000136
2.1 KB
5 CDS

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whole genome shotgun sequence
NZ_ACFY01000137
32.9 KB
43 CDS

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whole genome shotgun sequence
NZ_ACFY01000138
507 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000139
42.9 KB
56 CDS

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whole genome shotgun sequence
NZ_ACFY01000140
48.5 KB
56 CDS

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whole genome shotgun sequence
NZ_ACFY01000141
17.2 KB
13 CDS

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whole genome shotgun sequence
NZ_ACFY01000142
22.6 KB
33 CDS

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whole genome shotgun sequence
NZ_ACFY01000143
38.4 KB
39 CDS

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whole genome shotgun sequence
NZ_ACFY01000144
56.0 KB
54 CDS

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whole genome shotgun sequence
NZ_ACFY01000145
20.9 KB
19 CDS

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whole genome shotgun sequence
NZ_ACFY01000146
879 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACFY01000147
52.9 KB
54 CDS

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whole genome shotgun sequence
NZ_ACFY01000148
10.1 KB
15 CDS

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whole genome shotgun sequence
NZ_ACFY01000149
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000150
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACFY01000151
16.7 KB
19 CDS

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whole genome shotgun sequence
NZ_ACFY01000152
54.9 KB
61 CDS

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whole genome shotgun sequence
NZ_ACFY01000153
33.5 KB
37 CDS

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whole genome shotgun sequence
NZ_ACFY01000154
89.6 KB
115 CDS

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whole genome shotgun sequence
NZ_ACFY01000155
5.2 KB
5 CDS

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whole genome shotgun sequence
NZ_ACFY01000156
65.0 KB
70 CDS

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whole genome shotgun sequence
NZ_ACFY01000157
3.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ACFY01000158
56.0 KB
63 CDS

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whole genome shotgun sequence
NZ_ACFY01000159
24.1 KB
33 CDS

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whole genome shotgun sequence
NZ_ACFY01000160
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000161
83.5 KB
93 CDS

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whole genome shotgun sequence
NZ_ACFY01000162
13.8 KB
10 CDS

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whole genome shotgun sequence
NZ_ACFY01000163
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000164
3.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ACFY01000165
79.3 KB
87 CDS

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whole genome shotgun sequence
NZ_ACFY01000166
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000167
21.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ACFY01000168
27.4 KB
24 CDS

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whole genome shotgun sequence
NZ_ACFY01000169
7.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ACFY01000170
154.4 KB
167 CDS

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whole genome shotgun sequence
NZ_ACFY01000171
12.2 KB
11 CDS

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whole genome shotgun sequence
NZ_ACFY01000172
564 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000173
675 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000174
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACFY01000175
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACFY01000176
8.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ACFY01000177
25.2 KB
30 CDS

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whole genome shotgun sequence
NZ_ACFY01000178
4.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ACFY01000179
1.1 KB
1 CDS

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Taxonomy

External Links

Roseburia inulinivorans DSM 16841

Search Genome

Sequences

PubMed Search for Roseburia inulinivorans DSM 16841

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