Roseobacter sp. AzwK-3b

J. Craig Venter Institute

GC Content: 61.8%, Released Date: June 26, 2007 #18348

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABCR01000001
866.7 KB
847 CDS

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whole genome shotgun sequence
NZ_ABCR01000002
414.2 KB
435 CDS

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whole genome shotgun sequence
NZ_ABCR01000003
387.8 KB
398 CDS

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whole genome shotgun sequence
NZ_ABCR01000004
364.9 KB
364 CDS

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whole genome shotgun sequence
NZ_ABCR01000005
364.4 KB
359 CDS

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whole genome shotgun sequence
NZ_ABCR01000006
229.1 KB
243 CDS

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whole genome shotgun sequence
NZ_ABCR01000007
215.7 KB
221 CDS

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whole genome shotgun sequence
NZ_ABCR01000008
198.3 KB
208 CDS

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whole genome shotgun sequence
NZ_ABCR01000009
177.6 KB
186 CDS

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whole genome shotgun sequence
NZ_ABCR01000010
143.6 KB
121 CDS

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whole genome shotgun sequence
NZ_ABCR01000011
121.5 KB
136 CDS

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whole genome shotgun sequence
NZ_ABCR01000012
115.8 KB
110 CDS

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whole genome shotgun sequence
NZ_ABCR01000013
98.6 KB
107 CDS

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whole genome shotgun sequence
NZ_ABCR01000014
94.4 KB
85 CDS

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whole genome shotgun sequence
NZ_ABCR01000015
91.3 KB
119 CDS

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whole genome shotgun sequence
NZ_ABCR01000016
59.0 KB
62 CDS

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whole genome shotgun sequence
NZ_ABCR01000017
34.2 KB
35 CDS

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whole genome shotgun sequence
NZ_ABCR01000018
29.1 KB
32 CDS

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whole genome shotgun sequence
NZ_ABCR01000019
26.0 KB
29 CDS

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whole genome shotgun sequence
NZ_ABCR01000020
22.9 KB
33 CDS

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whole genome shotgun sequence
NZ_ABCR01000021
12.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ABCR01000022
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCR01000023
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCR01000024
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCR01000025
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABCR01000026
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCR01000027
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCR01000028
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCR01000029
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCR01000030
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCR01000031
396 bytes
1 CDS

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Taxonomy

External Links

Roseobacter sp. AzwK-3b

Search Genome

Sequences

PubMed Search for Roseobacter sp. AzwK-3b

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