Ruminococcus gnavus ATCC 29149

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 42.9%, Released Date: March 21, 2007 #18358

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAYG02000001
85.5 KB
121 CDS

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whole genome shotgun sequence
NZ_AAYG02000002
98.4 KB
133 CDS

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whole genome shotgun sequence
NZ_AAYG02000003
88.0 KB
96 CDS

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whole genome shotgun sequence
NZ_AAYG02000004
100.1 KB
108 CDS

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whole genome shotgun sequence
NZ_AAYG02000005
176.9 KB
201 CDS

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whole genome shotgun sequence
NZ_AAYG02000006
121.7 KB
143 CDS

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whole genome shotgun sequence
NZ_AAYG02000007
46.6 KB
42 CDS

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whole genome shotgun sequence
NZ_AAYG02000008
60.2 KB
71 CDS

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whole genome shotgun sequence
NZ_AAYG02000009
176.7 KB
176 CDS

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whole genome shotgun sequence
NZ_AAYG02000010
115.8 KB
151 CDS

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whole genome shotgun sequence
NZ_AAYG02000011
385.1 KB
416 CDS

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whole genome shotgun sequence
NZ_AAYG02000012
76.7 KB
85 CDS

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whole genome shotgun sequence
NZ_AAYG02000013
92.1 KB
87 CDS

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whole genome shotgun sequence
NZ_AAYG02000014
73.8 KB
89 CDS

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whole genome shotgun sequence
NZ_AAYG02000015
55.7 KB
65 CDS

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whole genome shotgun sequence
NZ_AAYG02000016
158.8 KB
228 CDS

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whole genome shotgun sequence
NZ_AAYG02000017
66.3 KB
80 CDS

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whole genome shotgun sequence
NZ_AAYG02000018
169.1 KB
211 CDS

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whole genome shotgun sequence
NZ_AAYG02000019
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_AAYG02000020
163.5 KB
189 CDS

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whole genome shotgun sequence
NZ_AAYG02000021
80.5 KB
92 CDS

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whole genome shotgun sequence
NZ_AAYG02000022
55.0 KB
63 CDS

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whole genome shotgun sequence
NZ_AAYG02000023
50.3 KB
54 CDS

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whole genome shotgun sequence
NZ_AAYG02000024
21.7 KB
29 CDS

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whole genome shotgun sequence
NZ_AAYG02000025
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_AAYG02000026
11.9 KB
15 CDS

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whole genome shotgun sequence
NZ_AAYG02000027
119.1 KB
120 CDS

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whole genome shotgun sequence
NZ_AAYG02000028
87.3 KB
99 CDS

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whole genome shotgun sequence
NZ_AAYG02000029
34.0 KB
43 CDS

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whole genome shotgun sequence
NZ_AAYG02000030
899 bytes
3 CDS

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whole genome shotgun sequence
NZ_AAYG02000031
232.1 KB
230 CDS

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whole genome shotgun sequence
NZ_AAYG02000032
248.2 KB
289 CDS

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whole genome shotgun sequence
NZ_AAYG02000033
24.2 KB
22 CDS

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whole genome shotgun sequence
NZ_AAYG02000034
29.4 KB
27 CDS

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whole genome shotgun sequence
NZ_AAYG02000035
18.8 KB
23 CDS

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whole genome shotgun sequence
NZ_AAYG02000036
27.6 KB
30 CDS

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whole genome shotgun sequence
NZ_AAYG02000037
8.5 KB
8 CDS

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whole genome shotgun sequence
NZ_AAYG02000038
8.7 KB
14 CDS

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whole genome shotgun sequence
NZ_AAYG02000039
9.6 KB
10 CDS

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whole genome shotgun sequence
NZ_AAYG02000040
9.0 KB
9 CDS

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whole genome shotgun sequence
NZ_AAYG02000041
3.8 KB
9 CDS

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whole genome shotgun sequence
NZ_AAYG02000042
23.3 KB
23 CDS

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whole genome shotgun sequence
NZ_AAYG02000043
1.2 KB
4 CDS

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Taxonomy

External Links

Ruminococcus gnavus ATCC 29149

Search Genome

Sequences

PubMed Search for Ruminococcus gnavus ATCC 29149

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