Ruminococcus obeum ATCC 29174

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 41.6%, Released Date: Feb. 13, 2007 #18360

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAVO02000001
448.5 KB
504 CDS

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whole genome shotgun sequence
NZ_AAVO02000002
423.8 KB
494 CDS

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whole genome shotgun sequence
NZ_AAVO02000003
212.5 KB
288 CDS

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whole genome shotgun sequence
NZ_AAVO02000004
179.1 KB
219 CDS

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whole genome shotgun sequence
NZ_AAVO02000005
148.2 KB
170 CDS

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whole genome shotgun sequence
NZ_AAVO02000006
146.9 KB
201 CDS

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whole genome shotgun sequence
NZ_AAVO02000007
143.8 KB
184 CDS

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whole genome shotgun sequence
NZ_AAVO02000008
119.9 KB
154 CDS

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whole genome shotgun sequence
NZ_AAVO02000009
118.0 KB
115 CDS

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whole genome shotgun sequence
NZ_AAVO02000010
116.9 KB
119 CDS

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whole genome shotgun sequence
NZ_AAVO02000011
115.7 KB
125 CDS

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whole genome shotgun sequence
NZ_AAVO02000012
109.7 KB
122 CDS

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whole genome shotgun sequence
NZ_AAVO02000013
109.4 KB
123 CDS

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whole genome shotgun sequence
NZ_AAVO02000014
100.0 KB
113 CDS

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whole genome shotgun sequence
NZ_AAVO02000015
85.4 KB
108 CDS

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whole genome shotgun sequence
NZ_AAVO02000016
76.4 KB
79 CDS

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whole genome shotgun sequence
NZ_AAVO02000017
68.3 KB
77 CDS

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whole genome shotgun sequence
NZ_AAVO02000018
61.6 KB
71 CDS

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whole genome shotgun sequence
NZ_AAVO02000019
57.3 KB
62 CDS

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whole genome shotgun sequence
NZ_AAVO02000020
56.7 KB
69 CDS

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whole genome shotgun sequence
NZ_AAVO02000021
56.3 KB
76 CDS

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whole genome shotgun sequence
NZ_AAVO02000022
54.1 KB
71 CDS

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whole genome shotgun sequence
NZ_AAVO02000023
53.9 KB
52 CDS

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whole genome shotgun sequence
NZ_AAVO02000024
51.8 KB
66 CDS

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whole genome shotgun sequence
NZ_AAVO02000025
49.0 KB
57 CDS

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whole genome shotgun sequence
NZ_AAVO02000026
38.5 KB
56 CDS

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whole genome shotgun sequence
NZ_AAVO02000027
32.7 KB
29 CDS

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whole genome shotgun sequence
NZ_AAVO02000028
32.7 KB
41 CDS

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whole genome shotgun sequence
NZ_AAVO02000029
31.9 KB
36 CDS

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whole genome shotgun sequence
NZ_AAVO02000030
28.7 KB
37 CDS

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whole genome shotgun sequence
NZ_AAVO02000031
28.5 KB
34 CDS

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whole genome shotgun sequence
NZ_AAVO02000032
21.0 KB
21 CDS

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whole genome shotgun sequence
NZ_AAVO02000033
20.7 KB
25 CDS

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whole genome shotgun sequence
NZ_AAVO02000034
17.6 KB
17 CDS

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whole genome shotgun sequence
NZ_AAVO02000035
17.5 KB
23 CDS

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whole genome shotgun sequence
NZ_AAVO02000036
16.6 KB
19 CDS

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whole genome shotgun sequence
NZ_AAVO02000037
13.3 KB
18 CDS

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whole genome shotgun sequence
NZ_AAVO02000038
11.2 KB
11 CDS

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whole genome shotgun sequence
NZ_AAVO02000039
11.1 KB
12 CDS

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whole genome shotgun sequence
NZ_AAVO02000040
9.5 KB
11 CDS

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whole genome shotgun sequence
NZ_AAVO02000041
8.3 KB
11 CDS

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whole genome shotgun sequence
NZ_AAVO02000042
6.0 KB
9 CDS

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whole genome shotgun sequence
NZ_AAVO02000043
4.6 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVO02000044
3.5 KB
5 CDS

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whole genome shotgun sequence
NZ_AAVO02000045
3.3 KB
7 CDS

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whole genome shotgun sequence
NZ_AAVO02000046
2.6 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVO02000047
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVO02000048
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVO02000049
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVO02000050
1.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVO02000051
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_AAVO02000052
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVO02000053
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_AAVO02000054
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVO02000055
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_AAVO02000056
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVO02000057
850 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAVO02000058
814 bytes
2 CDS

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whole genome shotgun sequence
NZ_AAVO02000059
677 bytes
2 CDS

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whole genome shotgun sequence
NZ_AAVO02000060
568 bytes
3 CDS

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whole genome shotgun sequence
NZ_AAVO02000061
267 bytes
1 CDS

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whole genome shotgun sequence
NZ_AAVO02000062
134 bytes
0 CDS

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Taxonomy

External Links

Ruminococcus obeum ATCC 29174

Search Genome

Sequences

PubMed Search for Ruminococcus obeum ATCC 29174

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