Sagittula stellata E-37

J. Craig Venter Institute

GC Content: 65.0%, Released Date: March 7, 2007 #18363

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAYA01000001
561.3 KB
551 CDS

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whole genome shotgun sequence
NZ_AAYA01000002
480.2 KB
482 CDS

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whole genome shotgun sequence
NZ_AAYA01000003
463.9 KB
456 CDS

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whole genome shotgun sequence
NZ_AAYA01000004
424.3 KB
413 CDS

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whole genome shotgun sequence
NZ_AAYA01000005
332.7 KB
324 CDS

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whole genome shotgun sequence
NZ_AAYA01000006
310.4 KB
321 CDS

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whole genome shotgun sequence
NZ_AAYA01000007
233.0 KB
244 CDS

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whole genome shotgun sequence
NZ_AAYA01000008
221.3 KB
204 CDS

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whole genome shotgun sequence
NZ_AAYA01000009
217.5 KB
208 CDS

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whole genome shotgun sequence
NZ_AAYA01000010
189.0 KB
181 CDS

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whole genome shotgun sequence
NZ_AAYA01000011
186.9 KB
192 CDS

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whole genome shotgun sequence
NZ_AAYA01000012
174.8 KB
176 CDS

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whole genome shotgun sequence
NZ_AAYA01000013
162.5 KB
161 CDS

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whole genome shotgun sequence
NZ_AAYA01000014
127.6 KB
132 CDS

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whole genome shotgun sequence
NZ_AAYA01000015
120.6 KB
109 CDS

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whole genome shotgun sequence
NZ_AAYA01000016
117.1 KB
96 CDS

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whole genome shotgun sequence
NZ_AAYA01000017
112.3 KB
115 CDS

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whole genome shotgun sequence
NZ_AAYA01000018
109.5 KB
113 CDS

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whole genome shotgun sequence
NZ_AAYA01000019
79.2 KB
78 CDS

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whole genome shotgun sequence
NZ_AAYA01000020
78.9 KB
82 CDS

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whole genome shotgun sequence
NZ_AAYA01000021
67.0 KB
70 CDS

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whole genome shotgun sequence
NZ_AAYA01000022
58.2 KB
62 CDS

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whole genome shotgun sequence
NZ_AAYA01000023
41.9 KB
33 CDS

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whole genome shotgun sequence
NZ_AAYA01000024
37.4 KB
25 CDS

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whole genome shotgun sequence
NZ_AAYA01000025
36.5 KB
35 CDS

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whole genome shotgun sequence
NZ_AAYA01000026
31.7 KB
33 CDS

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whole genome shotgun sequence
NZ_AAYA01000027
27.2 KB
26 CDS

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whole genome shotgun sequence
NZ_AAYA01000028
23.6 KB
17 CDS

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whole genome shotgun sequence
NZ_AAYA01000029
18.8 KB
24 CDS

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whole genome shotgun sequence
NZ_AAYA01000030
16.6 KB
20 CDS

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whole genome shotgun sequence
NZ_AAYA01000031
16.4 KB
15 CDS

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whole genome shotgun sequence
NZ_AAYA01000032
15.9 KB
19 CDS

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whole genome shotgun sequence
NZ_AAYA01000033
13.1 KB
12 CDS

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whole genome shotgun sequence
NZ_AAYA01000034
12.1 KB
14 CDS

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whole genome shotgun sequence
NZ_AAYA01000035
11.8 KB
11 CDS

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whole genome shotgun sequence
NZ_AAYA01000036
3.4 KB
5 CDS

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whole genome shotgun sequence
NZ_AAYA01000037
1.9 KB
5 CDS

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whole genome shotgun sequence
NZ_AAYA01000038
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_AAYA01000039
1.1 KB
0 CDS

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Taxonomy

External Links

Sagittula stellata E-37

Search Genome

Sequences

PubMed Search for Sagittula stellata E-37

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