Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701

TIGR

GC Content: 52.3%, Released Date: May 10, 2007 #18364

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABAO01000001
327.5 KB
295 CDS

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whole genome shotgun sequence
NZ_ABAO01000002
237.1 KB
235 CDS

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whole genome shotgun sequence
NZ_ABAO01000003
231.3 KB
221 CDS

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whole genome shotgun sequence
NZ_ABAO01000004
230.0 KB
204 CDS

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whole genome shotgun sequence
NZ_ABAO01000005
222.2 KB
210 CDS

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whole genome shotgun sequence
NZ_ABAO01000006
174.6 KB
168 CDS

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whole genome shotgun sequence
NZ_ABAO01000007
162.0 KB
152 CDS

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whole genome shotgun sequence
NZ_ABAO01000008
153.4 KB
156 CDS

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whole genome shotgun sequence
NZ_ABAO01000009
135.4 KB
110 CDS

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whole genome shotgun sequence
NZ_ABAO01000010
133.9 KB
150 CDS

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whole genome shotgun sequence
NZ_ABAO01000011
117.6 KB
115 CDS

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whole genome shotgun sequence
NZ_ABAO01000012
115.5 KB
112 CDS

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whole genome shotgun sequence
NZ_ABAO01000013
109.4 KB
101 CDS

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whole genome shotgun sequence
NZ_ABAO01000014
101.3 KB
97 CDS

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whole genome shotgun sequence
NZ_ABAO01000015
98.1 KB
94 CDS

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whole genome shotgun sequence
NZ_ABAO01000016
86.5 KB
84 CDS

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whole genome shotgun sequence
NZ_ABAO01000017
81.9 KB
79 CDS

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whole genome shotgun sequence
NZ_ABAO01000018
81.9 KB
77 CDS

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whole genome shotgun sequence
NZ_ABAO01000019
74.5 KB
71 CDS

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whole genome shotgun sequence
NZ_ABAO01000020
73.0 KB
74 CDS

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whole genome shotgun sequence
NZ_ABAO01000021
73.0 KB
72 CDS

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whole genome shotgun sequence
NZ_ABAO01000022
71.0 KB
73 CDS

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whole genome shotgun sequence
NZ_ABAO01000023
68.3 KB
65 CDS

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whole genome shotgun sequence
NZ_ABAO01000024
67.2 KB
68 CDS

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whole genome shotgun sequence
NZ_ABAO01000025
66.2 KB
55 CDS

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whole genome shotgun sequence
NZ_ABAO01000026
64.7 KB
76 CDS

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whole genome shotgun sequence
NZ_ABAO01000027
64.4 KB
80 CDS

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whole genome shotgun sequence
NZ_ABAO01000028
58.3 KB
51 CDS

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whole genome shotgun sequence
NZ_ABAO01000029
54.0 KB
64 CDS

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whole genome shotgun sequence
NZ_ABAO01000030
53.3 KB
51 CDS

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whole genome shotgun sequence
NZ_ABAO01000031
52.1 KB
49 CDS

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whole genome shotgun sequence
NZ_ABAO01000032
51.8 KB
59 CDS

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whole genome shotgun sequence
NZ_ABAO01000033
50.2 KB
52 CDS

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whole genome shotgun sequence
NZ_ABAO01000034
49.4 KB
53 CDS

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whole genome shotgun sequence
NZ_ABAO01000035
48.7 KB
52 CDS

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whole genome shotgun sequence
NZ_ABAO01000036
45.6 KB
44 CDS

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whole genome shotgun sequence
NZ_ABAO01000037
44.3 KB
43 CDS

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whole genome shotgun sequence
NZ_ABAO01000038
43.3 KB
38 CDS

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whole genome shotgun sequence
NZ_ABAO01000039
41.8 KB
40 CDS

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whole genome shotgun sequence
NZ_ABAO01000040
40.5 KB
40 CDS

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whole genome shotgun sequence
NZ_ABAO01000041
40.3 KB
39 CDS

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whole genome shotgun sequence
NZ_ABAO01000042
38.8 KB
38 CDS

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whole genome shotgun sequence
NZ_ABAO01000043
35.1 KB
31 CDS

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whole genome shotgun sequence
NZ_ABAO01000044
34.5 KB
34 CDS

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whole genome shotgun sequence
NZ_ABAO01000045
31.9 KB
28 CDS

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whole genome shotgun sequence
NZ_ABAO01000046
31.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ABAO01000047
31.2 KB
32 CDS

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whole genome shotgun sequence
NZ_ABAO01000048
28.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ABAO01000049
26.7 KB
39 CDS

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whole genome shotgun sequence
NZ_ABAO01000050
24.5 KB
21 CDS

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whole genome shotgun sequence
NZ_ABAO01000051
24.3 KB
25 CDS

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whole genome shotgun sequence
NZ_ABAO01000052
23.4 KB
28 CDS

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whole genome shotgun sequence
NZ_ABAO01000053
23.2 KB
17 CDS

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whole genome shotgun sequence
NZ_ABAO01000054
22.8 KB
22 CDS

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whole genome shotgun sequence
NZ_ABAO01000055
19.8 KB
25 CDS

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whole genome shotgun sequence
NZ_ABAO01000056
19.7 KB
12 CDS

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whole genome shotgun sequence
NZ_ABAO01000057
19.5 KB
26 CDS

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whole genome shotgun sequence
NZ_ABAO01000058
17.8 KB
20 CDS

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whole genome shotgun sequence
NZ_ABAO01000059
17.2 KB
16 CDS

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whole genome shotgun sequence
NZ_ABAO01000060
15.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ABAO01000061
14.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ABAO01000062
14.5 KB
18 CDS

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whole genome shotgun sequence
NZ_ABAO01000063
12.1 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAO01000064
11.0 KB
15 CDS

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whole genome shotgun sequence
NZ_ABAO01000065
10.7 KB
7 CDS

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whole genome shotgun sequence
NZ_ABAO01000066
10.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ABAO01000067
10.7 KB
17 CDS

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whole genome shotgun sequence
NZ_ABAO01000068
9.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAO01000069
8.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAO01000070
8.4 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAO01000071
7.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ABAO01000072
6.5 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAO01000073
6.4 KB
7 CDS

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whole genome shotgun sequence
NZ_ABAO01000074
4.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAO01000075
4.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000076
4.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAO01000077
4.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000078
3.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAO01000079
3.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAO01000080
3.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAO01000081
3.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAO01000082
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAO01000083
2.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAO01000084
2.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAO01000085
2.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAO01000086
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000087
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000088
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000089
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAO01000090
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000091
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000092
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000093
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000094
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000095
986 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000096
954 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000097
953 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000098
935 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000099
933 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000100
924 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000101
912 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000102
910 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000103
902 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000104
877 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000105
875 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000106
851 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000107
842 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000108
838 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000109
817 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000110
785 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000111
741 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000112
553 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAO01000113
393 bytes
0 CDS

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Taxonomy

External Links

Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701

Search Genome

Sequences

PubMed Search for Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701

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