Salmonella enterica subsp. enterica serovar Heidelberg str. SL486

TIGR/JCVI

GC Content: 52.1%, Released Date: July 20, 2007 #18366

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABEL01000001
747.7 KB
734 CDS

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whole genome shotgun sequence
NZ_ABEL01000002
606.5 KB
615 CDS

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whole genome shotgun sequence
NZ_ABEL01000003
444.9 KB
413 CDS

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whole genome shotgun sequence
NZ_ABEL01000004
437.2 KB
421 CDS

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whole genome shotgun sequence
NZ_ABEL01000005
301.2 KB
307 CDS

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whole genome shotgun sequence
NZ_ABEL01000006
226.4 KB
225 CDS

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whole genome shotgun sequence
NZ_ABEL01000007
186.5 KB
160 CDS

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whole genome shotgun sequence
NZ_ABEL01000008
183.7 KB
171 CDS

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whole genome shotgun sequence
NZ_ABEL01000009
163.5 KB
145 CDS

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whole genome shotgun sequence
NZ_ABEL01000010
152.8 KB
159 CDS

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whole genome shotgun sequence
NZ_ABEL01000011
152.3 KB
143 CDS

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whole genome shotgun sequence
NZ_ABEL01000012
134.8 KB
133 CDS

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whole genome shotgun sequence
NZ_ABEL01000013
131.8 KB
141 CDS

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whole genome shotgun sequence
NZ_ABEL01000014
90.5 KB
82 CDS

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whole genome shotgun sequence
NZ_ABEL01000015
62.1 KB
60 CDS

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whole genome shotgun sequence
NZ_ABEL01000016
51.5 KB
45 CDS

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whole genome shotgun sequence
NZ_ABEL01000017
48.8 KB
37 CDS

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whole genome shotgun sequence
NZ_ABEL01000018
48.8 KB
54 CDS

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whole genome shotgun sequence
NZ_ABEL01000019
45.5 KB
54 CDS

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whole genome shotgun sequence
NZ_ABEL01000020
41.2 KB
38 CDS

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whole genome shotgun sequence
NZ_ABEL01000021
36.7 KB
44 CDS

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whole genome shotgun sequence
NZ_ABEL01000022
34.8 KB
31 CDS

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whole genome shotgun sequence
NZ_ABEL01000023
33.2 KB
31 CDS

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whole genome shotgun sequence
NZ_ABEL01000024
32.8 KB
29 CDS

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whole genome shotgun sequence
NZ_ABEL01000025
26.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ABEL01000026
22.7 KB
20 CDS

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whole genome shotgun sequence
NZ_ABEL01000027
21.5 KB
21 CDS

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whole genome shotgun sequence
NZ_ABEL01000028
20.4 KB
20 CDS

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whole genome shotgun sequence
NZ_ABEL01000029
20.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ABEL01000030
19.8 KB
18 CDS

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whole genome shotgun sequence
NZ_ABEL01000031
19.4 KB
19 CDS

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whole genome shotgun sequence
NZ_ABEL01000032
11.2 KB
15 CDS

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whole genome shotgun sequence
NZ_ABEL01000033
10.8 KB
7 CDS

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whole genome shotgun sequence
NZ_ABEL01000034
10.1 KB
9 CDS

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whole genome shotgun sequence
NZ_ABEL01000035
8.7 KB
7 CDS

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whole genome shotgun sequence
NZ_ABEL01000036
5.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEL01000037
4.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ABEL01000038
4.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEL01000039
3.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABEL01000040
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABEL01000041
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABEL01000042
2.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABEL01000043
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEL01000044
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABEL01000045
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEL01000046
1001 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEL01000047
704 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEL01000048
502 bytes
0 CDS

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Taxonomy

External Links

Salmonella enterica subsp. enterica serovar Heidelberg str. SL486

Search Genome

Sequences

PubMed Search for Salmonella enterica subsp. enterica serovar Heidelberg str. SL486

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