Salmonella enterica subsp. enterica serovar Newport str. SL317

J. Craig Venter Institute

GC Content: 52.1%, Released Date: Aug. 15, 2007 #18370

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABEW01000001
723.9 KB
752 CDS

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whole genome shotgun sequence
NZ_ABEW01000002
686.3 KB
678 CDS

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whole genome shotgun sequence
NZ_ABEW01000003
523.1 KB
505 CDS

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whole genome shotgun sequence
NZ_ABEW01000004
478.6 KB
444 CDS

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whole genome shotgun sequence
NZ_ABEW01000005
472.9 KB
474 CDS

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whole genome shotgun sequence
NZ_ABEW01000006
430.1 KB
411 CDS

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whole genome shotgun sequence
NZ_ABEW01000007
233.4 KB
218 CDS

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whole genome shotgun sequence
NZ_ABEW01000008
222.0 KB
194 CDS

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whole genome shotgun sequence
NZ_ABEW01000009
193.3 KB
174 CDS

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whole genome shotgun sequence
NZ_ABEW01000010
167.2 KB
194 CDS

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whole genome shotgun sequence
NZ_ABEW01000011
147.2 KB
143 CDS

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whole genome shotgun sequence
NZ_ABEW01000012
87.8 KB
79 CDS

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whole genome shotgun sequence
NZ_ABEW01000013
87.6 KB
79 CDS

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whole genome shotgun sequence
NZ_ABEW01000014
78.1 KB
76 CDS

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whole genome shotgun sequence
NZ_ABEW01000015
56.7 KB
66 CDS

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whole genome shotgun sequence
NZ_ABEW01000016
34.2 KB
40 CDS

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whole genome shotgun sequence
NZ_ABEW01000017
30.5 KB
27 CDS

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whole genome shotgun sequence
NZ_ABEW01000018
29.5 KB
33 CDS

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whole genome shotgun sequence
NZ_ABEW01000019
27.7 KB
26 CDS

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whole genome shotgun sequence
NZ_ABEW01000020
25.2 KB
43 CDS

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whole genome shotgun sequence
NZ_ABEW01000021
21.5 KB
23 CDS

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whole genome shotgun sequence
NZ_ABEW01000022
18.1 KB
18 CDS

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whole genome shotgun sequence
NZ_ABEW01000023
11.7 KB
10 CDS

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whole genome shotgun sequence
NZ_ABEW01000024
8.9 KB
11 CDS

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whole genome shotgun sequence
NZ_ABEW01000025
3.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABEW01000026
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000027
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000028
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABEW01000029
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000030
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000031
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000032
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABEW01000033
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000034
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000035
1022 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000036
998 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000037
976 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000038
951 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000039
914 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000040
913 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000041
906 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000042
889 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000043
875 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000044
857 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000045
849 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000046
826 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000047
815 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000048
809 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000049
746 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000050
745 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000051
732 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000052
716 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000053
696 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000054
650 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000055
650 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000056
649 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000057
635 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000058
635 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000059
625 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000060
624 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000061
624 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000062
624 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEW01000063
623 bytes
0 CDS

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Taxonomy

External Links

Salmonella enterica subsp. enterica serovar Newport str. SL317

Search Genome

Sequences

PubMed Search for Salmonella enterica subsp. enterica serovar Newport str. SL317

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