Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29

TIGR

GC Content: 52.2%, Released Date: May 10, 2007 #18372

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABAN01000001
449.2 KB
409 CDS

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whole genome shotgun sequence
NZ_ABAN01000002
390.0 KB
348 CDS

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whole genome shotgun sequence
NZ_ABAN01000003
264.1 KB
250 CDS

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whole genome shotgun sequence
NZ_ABAN01000004
239.0 KB
234 CDS

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whole genome shotgun sequence
NZ_ABAN01000005
206.8 KB
190 CDS

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whole genome shotgun sequence
NZ_ABAN01000006
200.9 KB
176 CDS

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whole genome shotgun sequence
NZ_ABAN01000007
194.6 KB
186 CDS

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whole genome shotgun sequence
NZ_ABAN01000008
187.3 KB
161 CDS

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whole genome shotgun sequence
NZ_ABAN01000009
155.6 KB
147 CDS

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whole genome shotgun sequence
NZ_ABAN01000010
147.0 KB
143 CDS

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whole genome shotgun sequence
NZ_ABAN01000011
146.9 KB
141 CDS

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whole genome shotgun sequence
NZ_ABAN01000012
142.1 KB
134 CDS

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whole genome shotgun sequence
NZ_ABAN01000013
128.8 KB
128 CDS

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whole genome shotgun sequence
NZ_ABAN01000014
91.3 KB
90 CDS

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whole genome shotgun sequence
NZ_ABAN01000015
86.3 KB
79 CDS

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whole genome shotgun sequence
NZ_ABAN01000016
82.2 KB
62 CDS

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whole genome shotgun sequence
NZ_ABAN01000017
81.2 KB
87 CDS

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whole genome shotgun sequence
NZ_ABAN01000018
73.5 KB
80 CDS

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whole genome shotgun sequence
NZ_ABAN01000019
65.4 KB
65 CDS

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whole genome shotgun sequence
NZ_ABAN01000020
63.5 KB
60 CDS

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whole genome shotgun sequence
NZ_ABAN01000021
62.5 KB
67 CDS

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whole genome shotgun sequence
NZ_ABAN01000022
54.5 KB
66 CDS

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whole genome shotgun sequence
NZ_ABAN01000023
54.4 KB
51 CDS

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whole genome shotgun sequence
NZ_ABAN01000024
52.5 KB
48 CDS

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whole genome shotgun sequence
NZ_ABAN01000025
51.7 KB
49 CDS

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whole genome shotgun sequence
NZ_ABAN01000026
47.3 KB
52 CDS

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whole genome shotgun sequence
NZ_ABAN01000027
46.6 KB
41 CDS

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whole genome shotgun sequence
NZ_ABAN01000028
43.3 KB
50 CDS

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whole genome shotgun sequence
NZ_ABAN01000029
41.1 KB
39 CDS

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whole genome shotgun sequence
NZ_ABAN01000030
35.5 KB
41 CDS

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whole genome shotgun sequence
NZ_ABAN01000031
35.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ABAN01000032
33.3 KB
32 CDS

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whole genome shotgun sequence
NZ_ABAN01000033
33.0 KB
29 CDS

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whole genome shotgun sequence
NZ_ABAN01000034
31.6 KB
38 CDS

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whole genome shotgun sequence
NZ_ABAN01000035
30.4 KB
29 CDS

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whole genome shotgun sequence
NZ_ABAN01000036
28.5 KB
19 CDS

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whole genome shotgun sequence
NZ_ABAN01000037
27.0 KB
23 CDS

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whole genome shotgun sequence
NZ_ABAN01000038
26.8 KB
25 CDS

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whole genome shotgun sequence
NZ_ABAN01000039
26.1 KB
26 CDS

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whole genome shotgun sequence
NZ_ABAN01000040
25.7 KB
27 CDS

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whole genome shotgun sequence
NZ_ABAN01000041
25.4 KB
22 CDS

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whole genome shotgun sequence
NZ_ABAN01000042
24.5 KB
24 CDS

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whole genome shotgun sequence
NZ_ABAN01000043
23.3 KB
26 CDS

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whole genome shotgun sequence
NZ_ABAN01000044
23.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ABAN01000045
22.5 KB
20 CDS

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whole genome shotgun sequence
NZ_ABAN01000046
21.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ABAN01000047
21.2 KB
13 CDS

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whole genome shotgun sequence
NZ_ABAN01000048
20.9 KB
21 CDS

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whole genome shotgun sequence
NZ_ABAN01000049
20.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ABAN01000050
20.2 KB
16 CDS

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whole genome shotgun sequence
NZ_ABAN01000051
19.6 KB
17 CDS

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whole genome shotgun sequence
NZ_ABAN01000052
18.9 KB
21 CDS

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whole genome shotgun sequence
NZ_ABAN01000053
17.2 KB
14 CDS

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whole genome shotgun sequence
NZ_ABAN01000054
16.3 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAN01000055
16.1 KB
12 CDS

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whole genome shotgun sequence
NZ_ABAN01000056
15.1 KB
16 CDS

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whole genome shotgun sequence
NZ_ABAN01000057
13.1 KB
28 CDS

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whole genome shotgun sequence
NZ_ABAN01000058
12.6 KB
13 CDS

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whole genome shotgun sequence
NZ_ABAN01000059
12.5 KB
14 CDS

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whole genome shotgun sequence
NZ_ABAN01000060
12.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAN01000061
11.1 KB
9 CDS

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whole genome shotgun sequence
NZ_ABAN01000062
11.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ABAN01000063
9.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ABAN01000064
9.0 KB
16 CDS

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whole genome shotgun sequence
NZ_ABAN01000065
8.7 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAN01000066
8.7 KB
13 CDS

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whole genome shotgun sequence
NZ_ABAN01000067
8.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ABAN01000068
8.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ABAN01000069
7.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAN01000070
6.5 KB
10 CDS

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whole genome shotgun sequence
NZ_ABAN01000071
6.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAN01000072
5.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ABAN01000073
5.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ABAN01000074
4.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAN01000075
4.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ABAN01000076
4.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ABAN01000077
4.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000078
4.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ABAN01000079
3.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAN01000080
3.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000081
3.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000082
3.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAN01000083
3.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAN01000084
3.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAN01000085
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAN01000086
2.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAN01000087
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAN01000088
2.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000089
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAN01000090
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000091
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAN01000092
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAN01000093
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000094
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000095
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000096
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABAN01000097
1.7 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000098
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000099
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000100
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAN01000101
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAN01000102
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000103
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000104
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000105
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000106
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000107
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000108
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAN01000109
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000110
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000111
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000112
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000113
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000114
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000115
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000116
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000117
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000118
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000119
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000120
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000121
1023 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000122
1009 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000123
1008 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000124
1008 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000125
1007 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000126
1007 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000127
1005 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000128
1002 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000129
995 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000130
990 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000131
989 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000132
989 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000133
987 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000134
986 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000135
984 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000136
983 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000137
980 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000138
975 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000139
973 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000140
972 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000141
967 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000142
965 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000143
964 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000144
964 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000145
962 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000146
961 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000147
961 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000148
958 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000149
955 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000150
955 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000151
949 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000152
945 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000153
943 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000154
942 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000155
942 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000156
935 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000157
932 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000158
930 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000159
926 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000160
916 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000161
910 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000162
909 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000163
908 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000164
905 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000165
904 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000166
887 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000167
878 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000168
867 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000169
864 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000170
854 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000171
851 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000172
846 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000173
835 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000174
834 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000175
813 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000176
796 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000177
794 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000178
782 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000179
727 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000180
692 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000181
593 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABAN01000182
538 bytes
0 CDS

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Taxonomy

External Links

Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29

Search Genome

Sequences

PubMed Search for Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29

Related Genomes