Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480

J. Craig Venter Institute

GC Content: 52.2%, Released Date: July 20, 2007 #18373

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABEJ01000001
458.1 KB
438 CDS

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whole genome shotgun sequence
NZ_ABEJ01000002
428.5 KB
402 CDS

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whole genome shotgun sequence
NZ_ABEJ01000003
310.5 KB
303 CDS

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whole genome shotgun sequence
NZ_ABEJ01000004
287.8 KB
280 CDS

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whole genome shotgun sequence
NZ_ABEJ01000005
223.3 KB
211 CDS

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whole genome shotgun sequence
NZ_ABEJ01000006
201.6 KB
204 CDS

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whole genome shotgun sequence
NZ_ABEJ01000007
185.3 KB
172 CDS

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whole genome shotgun sequence
NZ_ABEJ01000008
164.6 KB
154 CDS

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whole genome shotgun sequence
NZ_ABEJ01000009
158.3 KB
161 CDS

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whole genome shotgun sequence
NZ_ABEJ01000010
156.2 KB
141 CDS

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whole genome shotgun sequence
NZ_ABEJ01000011
148.7 KB
146 CDS

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whole genome shotgun sequence
NZ_ABEJ01000012
135.0 KB
129 CDS

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whole genome shotgun sequence
NZ_ABEJ01000013
131.5 KB
130 CDS

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whole genome shotgun sequence
NZ_ABEJ01000014
126.9 KB
124 CDS

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whole genome shotgun sequence
NZ_ABEJ01000015
105.8 KB
101 CDS

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whole genome shotgun sequence
NZ_ABEJ01000016
98.8 KB
75 CDS

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whole genome shotgun sequence
NZ_ABEJ01000017
91.6 KB
86 CDS

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whole genome shotgun sequence
NZ_ABEJ01000018
90.2 KB
79 CDS

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whole genome shotgun sequence
NZ_ABEJ01000019
85.1 KB
96 CDS

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whole genome shotgun sequence
NZ_ABEJ01000020
82.3 KB
76 CDS

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whole genome shotgun sequence
NZ_ABEJ01000021
79.1 KB
74 CDS

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whole genome shotgun sequence
NZ_ABEJ01000022
75.6 KB
85 CDS

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whole genome shotgun sequence
NZ_ABEJ01000023
71.4 KB
68 CDS

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whole genome shotgun sequence
NZ_ABEJ01000024
62.6 KB
71 CDS

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whole genome shotgun sequence
NZ_ABEJ01000025
62.4 KB
72 CDS

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whole genome shotgun sequence
NZ_ABEJ01000026
57.9 KB
64 CDS

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whole genome shotgun sequence
NZ_ABEJ01000027
57.3 KB
70 CDS

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whole genome shotgun sequence
NZ_ABEJ01000028
54.8 KB
53 CDS

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whole genome shotgun sequence
NZ_ABEJ01000029
54.5 KB
51 CDS

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whole genome shotgun sequence
NZ_ABEJ01000030
52.0 KB
50 CDS

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whole genome shotgun sequence
NZ_ABEJ01000031
40.6 KB
32 CDS

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whole genome shotgun sequence
NZ_ABEJ01000032
40.2 KB
50 CDS

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whole genome shotgun sequence
NZ_ABEJ01000033
29.3 KB
25 CDS

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whole genome shotgun sequence
NZ_ABEJ01000034
27.3 KB
24 CDS

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whole genome shotgun sequence
NZ_ABEJ01000035
21.6 KB
20 CDS

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whole genome shotgun sequence
NZ_ABEJ01000036
20.9 KB
28 CDS

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whole genome shotgun sequence
NZ_ABEJ01000037
20.6 KB
20 CDS

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whole genome shotgun sequence
NZ_ABEJ01000038
19.9 KB
25 CDS

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whole genome shotgun sequence
NZ_ABEJ01000039
17.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ABEJ01000040
13.1 KB
16 CDS

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whole genome shotgun sequence
NZ_ABEJ01000041
12.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ABEJ01000042
12.1 KB
10 CDS

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whole genome shotgun sequence
NZ_ABEJ01000043
11.1 KB
13 CDS

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whole genome shotgun sequence
NZ_ABEJ01000044
10.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ABEJ01000045
5.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ABEJ01000046
5.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000047
4.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000048
4.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000049
3.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ABEJ01000050
3.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABEJ01000051
3.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABEJ01000052
3.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABEJ01000053
3.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000054
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABEJ01000055
2.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ABEJ01000056
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000057
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000058
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABEJ01000059
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000060
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000061
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000062
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000063
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000064
980 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000065
900 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABEJ01000066
857 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEJ01000067
855 bytes
0 CDS

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Taxonomy

External Links

Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480

Search Genome

Sequences

PubMed Search for Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480

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