Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537

TIGR/JCVI

GC Content: 52.2%, Released Date: Aug. 31, 2007 #18386

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABFF01000001
517.3 KB
491 CDS

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whole genome shotgun sequence
NZ_ABFF01000002
410.1 KB
391 CDS

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whole genome shotgun sequence
NZ_ABFF01000003
391.0 KB
376 CDS

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whole genome shotgun sequence
NZ_ABFF01000004
345.9 KB
346 CDS

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whole genome shotgun sequence
NZ_ABFF01000005
287.9 KB
290 CDS

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whole genome shotgun sequence
NZ_ABFF01000006
280.7 KB
276 CDS

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whole genome shotgun sequence
NZ_ABFF01000007
224.2 KB
215 CDS

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whole genome shotgun sequence
NZ_ABFF01000008
214.2 KB
228 CDS

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whole genome shotgun sequence
NZ_ABFF01000009
201.5 KB
186 CDS

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whole genome shotgun sequence
NZ_ABFF01000010
183.6 KB
185 CDS

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whole genome shotgun sequence
NZ_ABFF01000011
169.5 KB
145 CDS

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whole genome shotgun sequence
NZ_ABFF01000012
146.6 KB
126 CDS

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whole genome shotgun sequence
NZ_ABFF01000013
140.9 KB
140 CDS

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whole genome shotgun sequence
NZ_ABFF01000014
116.9 KB
110 CDS

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whole genome shotgun sequence
NZ_ABFF01000015
107.2 KB
120 CDS

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whole genome shotgun sequence
NZ_ABFF01000016
93.0 KB
93 CDS

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whole genome shotgun sequence
NZ_ABFF01000017
92.4 KB
83 CDS

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whole genome shotgun sequence
NZ_ABFF01000018
89.5 KB
86 CDS

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whole genome shotgun sequence
NZ_ABFF01000019
76.9 KB
83 CDS

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whole genome shotgun sequence
NZ_ABFF01000020
71.6 KB
84 CDS

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whole genome shotgun sequence
NZ_ABFF01000021
64.0 KB
63 CDS

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whole genome shotgun sequence
NZ_ABFF01000022
60.4 KB
69 CDS

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whole genome shotgun sequence
NZ_ABFF01000023
54.5 KB
50 CDS

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whole genome shotgun sequence
NZ_ABFF01000024
52.0 KB
50 CDS

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whole genome shotgun sequence
NZ_ABFF01000025
50.4 KB
34 CDS

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whole genome shotgun sequence
NZ_ABFF01000026
41.5 KB
45 CDS

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whole genome shotgun sequence
NZ_ABFF01000027
41.4 KB
47 CDS

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whole genome shotgun sequence
NZ_ABFF01000028
37.9 KB
30 CDS

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whole genome shotgun sequence
NZ_ABFF01000029
34.8 KB
32 CDS

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whole genome shotgun sequence
NZ_ABFF01000030
30.4 KB
37 CDS

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whole genome shotgun sequence
NZ_ABFF01000031
27.0 KB
15 CDS

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whole genome shotgun sequence
NZ_ABFF01000032
23.8 KB
25 CDS

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whole genome shotgun sequence
NZ_ABFF01000033
22.8 KB
21 CDS

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whole genome shotgun sequence
NZ_ABFF01000034
22.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ABFF01000035
20.3 KB
20 CDS

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whole genome shotgun sequence
NZ_ABFF01000036
20.0 KB
22 CDS

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whole genome shotgun sequence
NZ_ABFF01000037
16.8 KB
9 CDS

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whole genome shotgun sequence
NZ_ABFF01000038
15.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ABFF01000039
11.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ABFF01000040
11.1 KB
15 CDS

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whole genome shotgun sequence
NZ_ABFF01000041
9.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ABFF01000042
9.7 KB
10 CDS

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whole genome shotgun sequence
NZ_ABFF01000043
8.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ABFF01000044
7.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000045
5.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFF01000046
4.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000047
4.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000048
4.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000049
3.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000050
3.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ABFF01000051
3.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFF01000052
2.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000053
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABFF01000054
2.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000055
2.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000056
2.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000057
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000058
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFF01000059
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFF01000060
1.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000061
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000062
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABFF01000063
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000064
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABFF01000065
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABFF01000066
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABFF01000067
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000068
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000069
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000070
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000071
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000072
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000073
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000074
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000075
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000076
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000077
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000078
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000079
1012 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000080
968 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABFF01000081
925 bytes
0 CDS

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Taxonomy

External Links

Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537

Search Genome

Sequences

PubMed Search for Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537

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