Slackia exigua ATCC 700122

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

Genome Size: 0.67 megabases, Released Date: Aug. 11, 2009 #18398

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACUX02000001
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACUX02000002
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACUX02000003
17.5 KB
18 CDS

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whole genome shotgun sequence
NZ_ACUX02000004
355.0 KB
350 CDS

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whole genome shotgun sequence
NZ_ACUX02000005
185.1 KB
186 CDS

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whole genome shotgun sequence
NZ_ACUX02000006
510.6 KB
503 CDS

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whole genome shotgun sequence
NZ_ACUX02000007
232.2 KB
223 CDS

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whole genome shotgun sequence
NZ_ACUX02000008
70.0 KB
71 CDS

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whole genome shotgun sequence
NZ_ACUX02000009
22.7 KB
18 CDS

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whole genome shotgun sequence
NZ_ACUX02000010
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACUX02000011
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACUX02000012
1.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACUX02000013
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ACUX02000014
41.9 KB
37 CDS

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whole genome shotgun sequence
NZ_ACUX02000015
847 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACUX02000016
238.5 KB
241 CDS

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whole genome shotgun sequence
NZ_ACUX02000017
23.0 KB
27 CDS

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whole genome shotgun sequence
NZ_ACUX02000018
26.3 KB
21 CDS

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whole genome shotgun sequence
NZ_ACUX02000019
314.4 KB
332 CDS

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Taxonomy

External Links

Slackia exigua ATCC 700122

Search Genome

Sequences

PubMed Search for Slackia exigua ATCC 700122

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