Sphingobacterium spiritivorum ATCC 33861

BCM

GC Content: 39.8%, Released Date: Feb. 20, 2009 #18400

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACHA01000001
40.9 KB
32 CDS

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whole genome shotgun sequence
NZ_ACHA01000002
26.6 KB
22 CDS

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whole genome shotgun sequence
NZ_ACHA01000003
81.6 KB
55 CDS

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whole genome shotgun sequence
NZ_ACHA01000004
36.4 KB
29 CDS

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whole genome shotgun sequence
NZ_ACHA01000005
96.7 KB
92 CDS

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whole genome shotgun sequence
NZ_ACHA01000006
220 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000007
223 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000008
5.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ACHA01000009
71.6 KB
70 CDS

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whole genome shotgun sequence
NZ_ACHA01000010
9.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ACHA01000011
72.5 KB
52 CDS

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whole genome shotgun sequence
NZ_ACHA01000012
42.6 KB
40 CDS

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whole genome shotgun sequence
NZ_ACHA01000013
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000014
16.5 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHA01000015
10.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ACHA01000016
127.0 KB
113 CDS

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whole genome shotgun sequence
NZ_ACHA01000017
14.4 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHA01000018
1017 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000019
433 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000020
217 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000021
743 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACHA01000022
73.7 KB
58 CDS

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whole genome shotgun sequence
NZ_ACHA01000023
87.0 KB
84 CDS

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whole genome shotgun sequence
NZ_ACHA01000024
54.8 KB
39 CDS

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whole genome shotgun sequence
NZ_ACHA01000025
169.7 KB
138 CDS

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whole genome shotgun sequence
NZ_ACHA01000026
3.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHA01000027
4.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHA01000028
252.2 KB
221 CDS

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whole genome shotgun sequence
NZ_ACHA01000029
207.2 KB
183 CDS

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whole genome shotgun sequence
NZ_ACHA01000030
34.7 KB
34 CDS

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whole genome shotgun sequence
NZ_ACHA01000031
43.6 KB
45 CDS

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whole genome shotgun sequence
NZ_ACHA01000032
60.8 KB
62 CDS

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whole genome shotgun sequence
NZ_ACHA01000033
242 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000034
202 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000035
611 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000036
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000037
239 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000038
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000039
226 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000040
240 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000041
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHA01000042
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHA01000043
210 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000044
210 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000045
240 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHA01000046
240 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHA01000047
219 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000048
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000049
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHA01000050
51.9 KB
44 CDS

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whole genome shotgun sequence
NZ_ACHA01000051
5.4 KB
9 CDS

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whole genome shotgun sequence
NZ_ACHA01000052
8.1 KB
6 CDS

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whole genome shotgun sequence
NZ_ACHA01000053
262 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000054
33.9 KB
42 CDS

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whole genome shotgun sequence
NZ_ACHA01000055
7.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHA01000056
90.4 KB
100 CDS

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whole genome shotgun sequence
NZ_ACHA01000057
22.9 KB
33 CDS

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whole genome shotgun sequence
NZ_ACHA01000058
92.4 KB
101 CDS

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whole genome shotgun sequence
NZ_ACHA01000059
59.7 KB
52 CDS

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whole genome shotgun sequence
NZ_ACHA01000060
61.3 KB
64 CDS

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whole genome shotgun sequence
NZ_ACHA01000061
309 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000062
203 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000063
3.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHA01000064
220 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000065
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000066
34.4 KB
32 CDS

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whole genome shotgun sequence
NZ_ACHA01000067
11.4 KB
13 CDS

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whole genome shotgun sequence
NZ_ACHA01000068
34.9 KB
33 CDS

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whole genome shotgun sequence
NZ_ACHA01000069
12.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ACHA01000070
78.3 KB
60 CDS

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whole genome shotgun sequence
NZ_ACHA01000071
37.3 KB
28 CDS

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whole genome shotgun sequence
NZ_ACHA01000072
64.0 KB
60 CDS

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whole genome shotgun sequence
NZ_ACHA01000073
22.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ACHA01000074
637 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000075
9.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ACHA01000076
3.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACHA01000077
14.4 KB
13 CDS

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whole genome shotgun sequence
NZ_ACHA01000078
79.6 KB
74 CDS

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whole genome shotgun sequence
NZ_ACHA01000079
132.1 KB
119 CDS

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whole genome shotgun sequence
NZ_ACHA01000080
142.7 KB
128 CDS

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whole genome shotgun sequence
NZ_ACHA01000081
10.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ACHA01000082
14.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ACHA01000083
451 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACHA01000084
230 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000085
225 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000086
202 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000087
274 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000088
888 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000089
253 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000090
196.2 KB
175 CDS

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whole genome shotgun sequence
NZ_ACHA01000091
163.5 KB
151 CDS

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whole genome shotgun sequence
NZ_ACHA01000092
2.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ACHA01000093
33.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ACHA01000094
3.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000095
31.6 KB
27 CDS

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whole genome shotgun sequence
NZ_ACHA01000096
66.8 KB
41 CDS

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whole genome shotgun sequence
NZ_ACHA01000097
15.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ACHA01000098
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000099
17.5 KB
10 CDS

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whole genome shotgun sequence
NZ_ACHA01000100
200.2 KB
168 CDS

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whole genome shotgun sequence
NZ_ACHA01000101
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ACHA01000102
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHA01000103
6.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ACHA01000104
301.3 KB
305 CDS

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whole genome shotgun sequence
NZ_ACHA01000105
42.4 KB
44 CDS

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whole genome shotgun sequence
NZ_ACHA01000106
3.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ACHA01000107
8.4 KB
10 CDS

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whole genome shotgun sequence
NZ_ACHA01000108
115.6 KB
100 CDS

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whole genome shotgun sequence
NZ_ACHA01000109
9.4 KB
7 CDS

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whole genome shotgun sequence
NZ_ACHA01000110
61.8 KB
67 CDS

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whole genome shotgun sequence
NZ_ACHA01000111
163.7 KB
153 CDS

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whole genome shotgun sequence
NZ_ACHA01000112
191.8 KB
172 CDS

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whole genome shotgun sequence
NZ_ACHA01000113
27.8 KB
26 CDS

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whole genome shotgun sequence
NZ_ACHA01000114
9.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ACHA01000115
137.3 KB
113 CDS

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whole genome shotgun sequence
NZ_ACHA01000116
93.9 KB
106 CDS

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whole genome shotgun sequence
NZ_ACHA01000117
36.3 KB
30 CDS

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whole genome shotgun sequence
NZ_ACHA01000118
84.5 KB
89 CDS

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whole genome shotgun sequence
NZ_ACHA01000119
262 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000120
568 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000121
51.7 KB
50 CDS

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whole genome shotgun sequence
NZ_ACHA01000122
76.7 KB
81 CDS

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whole genome shotgun sequence
NZ_ACHA01000123
256 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000124
251 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000125
238 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHA01000126
211 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000127
225 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000128
365 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000129
286 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000130
215 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000131
525 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000132
202 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000133
708 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000134
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000135
227 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000136
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACHA01000137
254 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHA01000138
250 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHA01000139
526 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACHA01000140
225 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACHA01000141
224 bytes
0 CDS

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Taxonomy

External Links

Sphingobacterium spiritivorum ATCC 33861

Search Genome

Sequences

PubMed Search for Sphingobacterium spiritivorum ATCC 33861

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