Staphylococcus aureus A10102

Broad Institute

Genome Size: 2.8 megabases, GC Content: 32.8%, Released Date: Dec. 30, 2009 #20663

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACSO01000001
221.0 KB
210 CDS

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whole genome shotgun sequence
NZ_ACSO01000002
182.7 KB
188 CDS

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whole genome shotgun sequence
NZ_ACSO01000003
176.2 KB
208 CDS

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whole genome shotgun sequence
NZ_ACSO01000004
175.6 KB
176 CDS

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whole genome shotgun sequence
NZ_ACSO01000005
167.3 KB
160 CDS

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whole genome shotgun sequence
NZ_ACSO01000006
164.1 KB
180 CDS

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whole genome shotgun sequence
NZ_ACSO01000007
132.6 KB
119 CDS

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whole genome shotgun sequence
NZ_ACSO01000008
129.3 KB
111 CDS

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whole genome shotgun sequence
NZ_ACSO01000009
128.8 KB
109 CDS

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whole genome shotgun sequence
NZ_ACSO01000010
114.9 KB
92 CDS

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whole genome shotgun sequence
NZ_ACSO01000011
107.2 KB
126 CDS

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whole genome shotgun sequence
NZ_ACSO01000012
105.0 KB
118 CDS

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whole genome shotgun sequence
NZ_ACSO01000013
90.2 KB
81 CDS

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whole genome shotgun sequence
NZ_ACSO01000014
88.8 KB
85 CDS

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whole genome shotgun sequence
NZ_ACSO01000015
71.9 KB
82 CDS

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whole genome shotgun sequence
NZ_ACSO01000016
70.6 KB
75 CDS

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whole genome shotgun sequence
NZ_ACSO01000017
60.8 KB
69 CDS

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whole genome shotgun sequence
NZ_ACSO01000018
57.3 KB
68 CDS

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whole genome shotgun sequence
NZ_ACSO01000019
54.4 KB
49 CDS

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whole genome shotgun sequence
NZ_ACSO01000020
45.9 KB
43 CDS

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whole genome shotgun sequence
NZ_ACSO01000021
45.3 KB
48 CDS

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whole genome shotgun sequence
NZ_ACSO01000022
42.4 KB
46 CDS

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whole genome shotgun sequence
NZ_ACSO01000023
37.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACSO01000024
37.6 KB
48 CDS

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whole genome shotgun sequence
NZ_ACSO01000025
36.7 KB
39 CDS

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whole genome shotgun sequence
NZ_ACSO01000026
34.1 KB
27 CDS

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whole genome shotgun sequence
NZ_ACSO01000027
33.9 KB
35 CDS

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whole genome shotgun sequence
NZ_ACSO01000028
24.4 KB
42 CDS

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whole genome shotgun sequence
NZ_ACSO01000029
19.6 KB
21 CDS

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whole genome shotgun sequence
NZ_ACSO01000030
19.2 KB
16 CDS

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whole genome shotgun sequence
NZ_ACSO01000031
15.9 KB
14 CDS

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whole genome shotgun sequence
NZ_ACSO01000032
12.7 KB
12 CDS

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whole genome shotgun sequence
NZ_ACSO01000033
10.8 KB
11 CDS

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whole genome shotgun sequence
NZ_ACSO01000034
9.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ACSO01000035
6.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ACSO01000036
4.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ACSO01000037
3.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACSO01000038
3.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ACSO01000039
3.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACSO01000040
2.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ACSO01000041
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ACSO01000042
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ACSO01000043
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ACSO01000044
791 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACSO01000045
635 bytes
0 CDS

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Taxonomy

External Links

Staphylococcus aureus A10102

Search Genome

Sequences

PubMed Search for Staphylococcus aureus A10102

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