Staphylococcus aureus A9781

Broad Institute

Genome Size: 2.8 megabases, Released Date: Aug. 21, 2009 #18412

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACKL01000001
871 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKL01000002
60.6 KB
66 CDS

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whole genome shotgun sequence
NZ_ACKL01000003
20.5 KB
21 CDS

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whole genome shotgun sequence
NZ_ACKL01000004
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ACKL01000005
2.4 KB
8 CDS

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whole genome shotgun sequence
NZ_ACKL01000006
48.0 KB
48 CDS

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whole genome shotgun sequence
NZ_ACKL01000007
70.2 KB
91 CDS

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whole genome shotgun sequence
NZ_ACKL01000008
19.2 KB
16 CDS

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whole genome shotgun sequence
NZ_ACKL01000009
20.2 KB
23 CDS

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whole genome shotgun sequence
NZ_ACKL01000010
4.7 KB
13 CDS

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whole genome shotgun sequence
NZ_ACKL01000011
33.9 KB
25 CDS

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whole genome shotgun sequence
NZ_ACKL01000012
129.2 KB
109 CDS

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whole genome shotgun sequence
NZ_ACKL01000013
1021 bytes
3 CDS

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whole genome shotgun sequence
NZ_ACKL01000014
150.3 KB
158 CDS

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whole genome shotgun sequence
NZ_ACKL01000015
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ACKL01000016
6.5 KB
6 CDS

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whole genome shotgun sequence
NZ_ACKL01000017
3.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ACKL01000018
3.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACKL01000019
868 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKL01000020
3.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACKL01000021
32.6 KB
36 CDS

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whole genome shotgun sequence
NZ_ACKL01000022
2.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ACKL01000023
53.4 KB
51 CDS

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whole genome shotgun sequence
NZ_ACKL01000024
2.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ACKL01000025
51.9 KB
55 CDS

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whole genome shotgun sequence
NZ_ACKL01000026
182.6 KB
152 CDS

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whole genome shotgun sequence
NZ_ACKL01000027
163.1 KB
139 CDS

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whole genome shotgun sequence
NZ_ACKL01000028
4.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ACKL01000029
43.2 KB
51 CDS

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whole genome shotgun sequence
NZ_ACKL01000030
37.7 KB
36 CDS

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whole genome shotgun sequence
NZ_ACKL01000031
142.3 KB
130 CDS

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whole genome shotgun sequence
NZ_ACKL01000032
792 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKL01000033
89.2 KB
78 CDS

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whole genome shotgun sequence
NZ_ACKL01000034
26.6 KB
24 CDS

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whole genome shotgun sequence
NZ_ACKL01000035
19.6 KB
19 CDS

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whole genome shotgun sequence
NZ_ACKL01000036
297.9 KB
304 CDS

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whole genome shotgun sequence
NZ_ACKL01000037
172.2 KB
182 CDS

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whole genome shotgun sequence
NZ_ACKL01000038
59.4 KB
58 CDS

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whole genome shotgun sequence
NZ_ACKL01000039
32.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ACKL01000040
3.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ACKL01000041
237.9 KB
231 CDS

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whole genome shotgun sequence
NZ_ACKL01000042
54.9 KB
46 CDS

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whole genome shotgun sequence
NZ_ACKL01000043
11.9 KB
14 CDS

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whole genome shotgun sequence
NZ_ACKL01000044
52.8 KB
48 CDS

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whole genome shotgun sequence
NZ_ACKL01000045
513 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACKL01000046
10.8 KB
10 CDS

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whole genome shotgun sequence
NZ_ACKL01000047
2.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ACKL01000048
376.8 KB
325 CDS

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whole genome shotgun sequence
NZ_ACKL01000049
5.2 KB
12 CDS

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whole genome shotgun sequence
NZ_ACKL01000050
4.3 KB
9 CDS

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Taxonomy

External Links

Staphylococcus aureus A9781

Search Genome

Sequences

PubMed Search for Staphylococcus aureus A9781

Related Genomes