Staphylococcus aureus subsp. aureus 65-1322

Broad Institute

Genome Size: 2.8 megabases, Released Date: Aug. 21, 2009 #18415

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACJS01000001
786 bytes
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whole genome shotgun sequence
NZ_ACJS01000002
3.0 KB
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whole genome shotgun sequence
NZ_ACJS01000003
8.0 KB
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whole genome shotgun sequence
NZ_ACJS01000004
11.0 KB
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whole genome shotgun sequence
NZ_ACJS01000005
147.4 KB
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whole genome shotgun sequence
NZ_ACJS01000006
179.6 KB
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whole genome shotgun sequence
NZ_ACJS01000007
2.7 KB
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whole genome shotgun sequence
NZ_ACJS01000008
32.1 KB
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whole genome shotgun sequence
NZ_ACJS01000009
146.5 KB
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whole genome shotgun sequence
NZ_ACJS01000010
3.5 KB
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whole genome shotgun sequence
NZ_ACJS01000011
57.4 KB
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whole genome shotgun sequence
NZ_ACJS01000012
186.7 KB
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whole genome shotgun sequence
NZ_ACJS01000013
7.2 KB
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whole genome shotgun sequence
NZ_ACJS01000014
48.5 KB
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whole genome shotgun sequence
NZ_ACJS01000015
3.6 KB
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whole genome shotgun sequence
NZ_ACJS01000016
36.5 KB
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whole genome shotgun sequence
NZ_ACJS01000017
43.8 KB
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whole genome shotgun sequence
NZ_ACJS01000018
7.5 KB
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whole genome shotgun sequence
NZ_ACJS01000019
60.8 KB
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whole genome shotgun sequence
NZ_ACJS01000020
37.9 KB
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whole genome shotgun sequence
NZ_ACJS01000021
1.7 KB
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whole genome shotgun sequence
NZ_ACJS01000022
50.3 KB
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whole genome shotgun sequence
NZ_ACJS01000023
4.1 KB
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whole genome shotgun sequence
NZ_ACJS01000024
3.6 KB
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whole genome shotgun sequence
NZ_ACJS01000025
108.2 KB
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whole genome shotgun sequence
NZ_ACJS01000026
117.6 KB
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whole genome shotgun sequence
NZ_ACJS01000027
101.7 KB
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whole genome shotgun sequence
NZ_ACJS01000028
22.3 KB
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whole genome shotgun sequence
NZ_ACJS01000029
5.2 KB
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whole genome shotgun sequence
NZ_ACJS01000030
170.6 KB
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whole genome shotgun sequence
NZ_ACJS01000031
30.6 KB
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whole genome shotgun sequence
NZ_ACJS01000032
34.3 KB
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whole genome shotgun sequence
NZ_ACJS01000033
18.7 KB
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whole genome shotgun sequence
NZ_ACJS01000034
10.3 KB
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whole genome shotgun sequence
NZ_ACJS01000035
70.8 KB
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whole genome shotgun sequence
NZ_ACJS01000036
4.2 KB
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whole genome shotgun sequence
NZ_ACJS01000037
55.7 KB
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whole genome shotgun sequence
NZ_ACJS01000038
51.5 KB
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whole genome shotgun sequence
NZ_ACJS01000039
6.9 KB
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whole genome shotgun sequence
NZ_ACJS01000040
10.3 KB
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whole genome shotgun sequence
NZ_ACJS01000041
83.7 KB
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whole genome shotgun sequence
NZ_ACJS01000042
30.1 KB
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whole genome shotgun sequence
NZ_ACJS01000043
12.6 KB
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whole genome shotgun sequence
NZ_ACJS01000044
103.8 KB
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whole genome shotgun sequence
NZ_ACJS01000045
39.4 KB
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whole genome shotgun sequence
NZ_ACJS01000046
24.7 KB
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whole genome shotgun sequence
NZ_ACJS01000047
75.3 KB
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whole genome shotgun sequence
NZ_ACJS01000048
57.6 KB
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whole genome shotgun sequence
NZ_ACJS01000049
32.7 KB
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whole genome shotgun sequence
NZ_ACJS01000050
47.8 KB
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whole genome shotgun sequence
NZ_ACJS01000051
5.2 KB
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whole genome shotgun sequence
NZ_ACJS01000052
2.7 KB
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whole genome shotgun sequence
NZ_ACJS01000053
6.5 KB
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whole genome shotgun sequence
NZ_ACJS01000054
6.5 KB
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whole genome shotgun sequence
NZ_ACJS01000055
763 bytes
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whole genome shotgun sequence
NZ_ACJS01000056
91.2 KB
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whole genome shotgun sequence
NZ_ACJS01000057
13.0 KB
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whole genome shotgun sequence
NZ_ACJS01000058
1.8 KB
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whole genome shotgun sequence
NZ_ACJS01000059
21.5 KB
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whole genome shotgun sequence
NZ_ACJS01000060
38.7 KB
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whole genome shotgun sequence
NZ_ACJS01000061
25.7 KB
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whole genome shotgun sequence
NZ_ACJS01000062
12.7 KB
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whole genome shotgun sequence
NZ_ACJS01000063
67.5 KB
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whole genome shotgun sequence
NZ_ACJS01000064
808 bytes
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whole genome shotgun sequence
NZ_ACJS01000065
981 bytes
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whole genome shotgun sequence
NZ_ACJS01000066
1.0 KB
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whole genome shotgun sequence
NZ_ACJS01000067
1.5 KB
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whole genome shotgun sequence
NZ_ACJS01000068
1.3 KB
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whole genome shotgun sequence
NZ_ACJS01000069
385 bytes
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whole genome shotgun sequence
NZ_ACJS01000070
1.6 KB
0 CDS

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Taxonomy

External Links

Staphylococcus aureus subsp. aureus 65-1322

Search Genome

Sequences

PubMed Search for Staphylococcus aureus subsp. aureus 65-1322

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